Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_5296: 13664 - Hypothetical Protein, at 382436 to 382844 13664 mRNA_5297: 13665 - Hypothetical Protein, at 383150 to 384089 13665 mRNA_5298: 13666 - KOG0758 Mitochondrial carnitine-acylcarnitine carrier protein, at 386412 to 388025 13666 mRNA_5299: 13667 - BLAST RNA polymerase sigma factor, sigma-70 family [Rho..., at 388361 to 391277 13667 mRNA_5300: 13668 - K03023 RPC3, POLR3C DNA-directed RNA polymerase III subunit RPC3, at 391828 to 394452 13668
Group Condition mRNA_5296 mRNA_5297 mRNA_5298 mRNA_5299 mRNA_5300
13664
13665
13666
13667
13668
growth on ricinoleic acid YNB Methylricinoleic Acid -0.3 0.0   -0.2  
ypd buoyancy 40 hrs High Buoyancy -0.0 0.2   -0.5  
auxotrophy YNB Glucose 75mM Arginine 0.2 -0.3   -0.3  
facs on lipid accumulation Sorted Low BODIPY Gate -0.2 -0.0   -0.0  
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.3 0.1   -0.0  
growth on ricinoleic acid YNB Glucose -0.2 0.2   -0.2  
facs on lipid accumulation Sorted No BODIPY Gate -0.3 0.0   0.2  
auxotrophy YNB Glucose 75mM Methionine 0.0 -0.0   -0.1  
facs on lipid accumulation Sorted High BODIPY Gate -0.2 0.3   -0.2  
auxotrophy YNB Glucose 0.3 -0.0   -0.3  
growth on oleic acid YNB Oleic Acid -0.2 -0.1   0.4  
growth on ricinoleic acid YNB Ricinoleic Acid 0.3 0.1   -0.3  
growth on oleic acid YNB Glucose 0.2 -0.1   0.1  
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.1 -0.1   0.2  
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.1 0.1   0.1  
auxotrophy Dropout Complete 0.3 0.1   -0.1  
ypd buoyancy 40 hrs Low Buoyancy 0.0 0.3   0.0  
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.0 0.1   0.2  
ypd buoyancy 40 hrs Median Buoyancy 0.2 0.2   0.1  
growth on ypd YPD 0.5 0.1   -0.1  
ypd buoyancy 40 hrs No Buoyancy Separation 0.1 0.1   0.3  
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