Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_5290: 13658 - HMMPfam-ARID/BRIGHT DNA binding domain-PF01388,ProSiteProfiles-ARID domain profile.-PS51011,SMART-BRIGHT, ARID (A/T-rich interaction domain) domain-SM00501,SMART-ARID/BRIGHT DNA binding domain-SM01014,SUPERFAMILY--SSF46774, at 365926 to 369880 13658 mRNA_5291: 13659 - K00799 GST, gst glutathione S-transferase, at 370278 to 371436 13659 mRNA_5292: 13660 - Hypothetical Protein, at 372061 to 373005 13660 mRNA_5293: 13661 - Hypothetical Protein, at 373499 to 378247 13661 mRNA_5294: 13662 - K02830 HRAD1, RAD17 cell cycle checkpoint protein, at 378624 to 380568 13662
Group Condition mRNA_5290 mRNA_5291 mRNA_5292 mRNA_5293 mRNA_5294
13658
13659
13660
13661
13662
facs on lipid accumulation Sorted Low BODIPY Gate 0.4 -0.3 -0.2 0.1 -4.3
facs on lipid accumulation Sorted High BODIPY Gate 0.0 -0.1 -0.3 0.2 -1.8
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 0.6 0.2 -0.0 -2.1
auxotrophy YNB Glucose 75mM Arginine -0.0 0.0 -0.0 -0.0 -1.3
growth on ricinoleic acid YNB Ricinoleic Acid -0.2 0.1 0.3 -0.0 -1.1
growth on ricinoleic acid YNB Glucose -0.1 -0.1 0.2 -0.1 -0.9
growth on ricinoleic acid YNB Methylricinoleic Acid 0.0 0.0 0.2 -0.2 -1.0
facs on lipid accumulation Sorted No BODIPY Gate 0.2 0.2 -0.2 0.2 -1.2
growth on ypd YPD 0.1 -0.2 -0.3 0.0 -0.4
growth on oleic acid YNB Oleic Acid -0.1 0.0 0.1 -0.2 -0.6
auxotrophy Dropout Complete -0.1 0.1 -0.1 -0.0 -0.5
auxotrophy YNB Glucose -0.0 0.2 -0.2 0.1 -0.8
auxotrophy YNB Glucose 75mM Methionine -0.1 0.4 -0.0 0.0 -0.7
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.0 0.3 0.0 -0.1 -0.5
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.3 0.3 0.0 -0.1 -0.8
growth on oleic acid YNB Glucose -0.1 0.1 0.2 0.1 -0.6
ypd buoyancy 40 hrs Median Buoyancy 0.1 -0.2 -0.1 -0.0 0.2
ypd buoyancy 40 hrs High Buoyancy 0.2 -0.2 0.0 0.2 -0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.2 0.3 0.1 0.0 -0.4
ypd buoyancy 40 hrs No Buoyancy Separation -0.1 -0.3 0.1 0.2 0.4
ypd buoyancy 40 hrs Low Buoyancy 0.0 -0.3 0.1 0.0 0.6
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