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Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Number of genes on each side:
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_5289: 13657 - K00344 qor, CRYZ NADPH2-quinone reductase, at 363937 to 365504
13657
mRNA_5290: 13658 - HMMPfam-ARID/BRIGHT DNA binding domain-PF01388,ProSiteProfiles-ARID domain profile.-PS51011,SMART-BRIGHT, ARID (A/T-rich interaction domain) domain-SM00501,SMART-ARID/BRIGHT DNA binding domain-SM01014,SUPERFAMILY--SSF46774, at 365926 to 369880
13658
mRNA_5291: 13659 - K00799 GST, gst glutathione S-transferase, at 370278 to 371436
13659
mRNA_5292: 13660 - Hypothetical Protein, at 372061 to 373005
13660
mRNA_5293: 13661 - Hypothetical Protein, at 373499 to 378247
13661
Group
Condition
mRNA_5289
mRNA_5290
mRNA_5291
mRNA_5292
mRNA_5293
13657
13658
13659
13660
13661
growth on ypd
YPD
0.2
0.1
-0.2
-0.3
0.0
growth on ricinoleic acid
YNB Glucose
-0.2
-0.1
-0.1
0.2
-0.1
growth on oleic acid
YNB Oleic Acid
-0.1
-0.1
0.0
0.1
-0.2
ypd buoyancy
40 hrs Median Buoyancy
0.1
0.1
-0.2
-0.1
-0.0
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.2
0.0
0.0
0.2
-0.2
ypd buoyancy
40 hrs Low Buoyancy
0.1
0.0
-0.3
0.1
0.0
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.2
-0.2
0.1
0.3
-0.0
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.1
-0.0
0.3
0.0
-0.1
ypd buoyancy
40 hrs No Buoyancy Separation
0.2
-0.1
-0.3
0.1
0.2
facs on lipid accumulation
Sorted High BODIPY Gate
0.3
0.0
-0.1
-0.3
0.2
ypd buoyancy
40 hrs High Buoyancy
-0.1
0.2
-0.2
0.0
0.2
auxotrophy
Dropout Complete
0.4
-0.1
0.1
-0.1
-0.0
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.3
0.3
0.3
0.0
-0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
0.3
0.4
-0.3
-0.2
0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.2
-0.1
0.6
0.2
-0.0
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.3
0.2
0.3
0.1
0.0
growth on oleic acid
YNB Glucose
0.1
-0.1
0.1
0.2
0.1
auxotrophy
YNB Glucose
0.4
-0.0
0.2
-0.2
0.1
facs on lipid accumulation
Sorted No BODIPY Gate
0.3
0.2
0.2
-0.2
0.2
auxotrophy
YNB Glucose 75mM Arginine
0.7
-0.0
0.0
-0.0
-0.0
auxotrophy
YNB Glucose 75mM Methionine
0.5
-0.1
0.4
-0.0
0.0
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