Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_5287: 13655 - KOG0835 Cyclin L, at 361446 to 362639 13655 mRNA_5288: 13656 - HMMPfam-Complex I intermediate-associated protein 30 (CIA30)-PF08547,SUPERFAMILY--SSF49785, at 362943 to 363833 13656 mRNA_5289: 13657 - K00344 qor, CRYZ NADPH2-quinone reductase, at 363937 to 365504 13657 mRNA_5290: 13658 - HMMPfam-ARID/BRIGHT DNA binding domain-PF01388,ProSiteProfiles-ARID domain profile.-PS51011,SMART-BRIGHT, ARID (A/T-rich interaction domain) domain-SM00501,SMART-ARID/BRIGHT DNA binding domain-SM01014,SUPERFAMILY--SSF46774, at 365926 to 369880 13658 mRNA_5291: 13659 - K00799 GST, gst glutathione S-transferase, at 370278 to 371436 13659
Group Condition mRNA_5287 mRNA_5288 mRNA_5289 mRNA_5290 mRNA_5291
13655
13656
13657
13658
13659
growth on ricinoleic acid YNB Ricinoleic Acid   -0.2 -0.2 -0.2 0.1
growth on ricinoleic acid YNB Glucose   0.0 -0.2 -0.1 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy   -0.3 -0.1 -0.0 0.3
growth on oleic acid YNB Oleic Acid   0.1 -0.1 -0.1 0.0
growth on ricinoleic acid YNB Methylricinoleic Acid   0.1 -0.2 0.0 0.0
ypd buoyancy 40 hrs High Buoyancy   0.1 -0.1 0.2 -0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation   -0.2 -0.2 -0.1 0.6
facs on lipid accumulation Sorted High BODIPY Gate   -0.2 0.3 0.0 -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy   -0.0 -0.3 0.3 0.3
ypd buoyancy 40 hrs Low Buoyancy   0.5 0.1 0.0 -0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy   -0.0 -0.3 0.2 0.3
growth on ypd YPD   0.2 0.2 0.1 -0.2
ypd buoyancy 40 hrs Median Buoyancy   0.4 0.1 0.1 -0.2
growth on oleic acid YNB Glucose   0.3 0.1 -0.1 0.1
ypd buoyancy 40 hrs No Buoyancy Separation   0.8 0.2 -0.1 -0.3
facs on lipid accumulation Sorted Low BODIPY Gate   0.4 0.3 0.4 -0.3
facs on lipid accumulation Sorted No BODIPY Gate   0.1 0.3 0.2 0.2
auxotrophy Dropout Complete   0.4 0.4 -0.1 0.1
auxotrophy YNB Glucose   0.3 0.4 -0.0 0.2
auxotrophy YNB Glucose 75mM Methionine   0.3 0.5 -0.1 0.4
auxotrophy YNB Glucose 75mM Arginine   0.5 0.7 -0.0 0.0
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