Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_5273: 13641 - K00004 BDH, butB (R,R)-butanediol dehydrogenase / meso-butanediol dehydrogenase / diacetyl reductase, at 332530 to 334206 13641 mRNA_5274: 13642 - KOG0032 Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily, at 334553 to 337184 13642 mRNA_5275: 13643 - K06688 UBE2C, UBC11 ubiquitin-conjugating enzyme E2 C, at 337519 to 338338 13643 mRNA_5276: 13644 - Hypothetical Protein, at 339259 to 340241 13644 mRNA_5277: 13645 - Hypothetical Protein, at 340398 to 341217 13645
Group Condition mRNA_5273 mRNA_5274 mRNA_5275 mRNA_5276 mRNA_5277
13641
13642
13643
13644
13645
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 -0.3 -1.0 -0.0 -0.5
growth on oleic acid YNB Oleic Acid 0.0 -1.0 -0.7 0.0 -0.2
growth on oleic acid YNB Glucose 0.2 -1.2 -0.4 -0.3 0.0
auxotrophy YNB Glucose 75mM Arginine -0.2 -1.3 -0.0 -0.1 -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid 0.1 -1.5 0.3 -0.2 -0.0
auxotrophy YNB Glucose -0.3 -0.7 0.0 -0.2 -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.0 -0.7 -0.3 0.3 -0.6
auxotrophy Dropout Complete -0.1 -1.0 -0.1 0.1 -0.1
auxotrophy YNB Glucose 75mM Methionine 0.0 -1.0 0.3 -0.2 -0.1
facs on lipid accumulation Sorted High BODIPY Gate -0.0 -0.4 0.0 -0.3 -0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.2 -0.3 -0.4 0.1 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.0 -0.3 -0.6 0.1 -0.1
growth on ricinoleic acid YNB Glucose -0.2 -1.2 0.6 -0.1 0.1
facs on lipid accumulation Sorted No BODIPY Gate -0.2 -0.2 -0.6 0.1 0.1
facs on lipid accumulation Sorted Low BODIPY Gate -0.0 -0.3 0.4 0.0 -0.2
ypd buoyancy 40 hrs Low Buoyancy 0.2 0.0 -0.1 -0.1 0.2
growth on ricinoleic acid YNB Ricinoleic Acid 0.1 -1.0 0.9 0.2 0.0
ypd buoyancy 40 hrs Median Buoyancy 0.3 0.1 -0.1 -0.1 0.1
growth on ypd YPD -0.3 -0.3 0.1 0.4 0.4
ypd buoyancy 40 hrs High Buoyancy 0.3 0.3 -0.0 -0.1 0.1
ypd buoyancy 40 hrs No Buoyancy Separation -0.4 1.5 -0.5 0.4 -0.0
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