Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_5267: 13635 - KOG2504 Monocarboxylate transporter, at 317317 to 318833 13635 mRNA_5268: 13636 - K10389 TUBG tubulin gamma, at 319582 to 321853 13636 mRNA_5269: 13637 - K03320 amt, AMT, MEP ammonium transporter, Amt family, at 322459 to 324944 13637 mRNA_5270: 13638 - Hypothetical Protein, at 326289 to 326690 13638 mRNA_5271: 13639 - K11841 USP10, UBP3 ubiquitin carboxyl-terminal hydrolase 10, at 327225 to 330329 13639
Group Condition mRNA_5267 mRNA_5268 mRNA_5269 mRNA_5270 mRNA_5271
13635
13636
13637
13638
13639
growth on ricinoleic acid YNB Ricinoleic Acid -0.4   -0.0 -0.5 -0.9
growth on oleic acid YNB Glucose 0.1   -0.3 -0.5 -1.1
facs on lipid accumulation Sorted Low BODIPY Gate -0.3   -0.4 -0.1 -0.6
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1   -0.2 -0.6 -0.5
auxotrophy YNB Glucose 75mM Arginine -0.1   -0.2 0.1 -0.8
ypd buoyancy 40 hrs No Buoyancy Separation 0.4   -0.4 -0.5 -0.6
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1   -0.1 -0.2 -0.6
facs on lipid accumulation Sorted High BODIPY Gate 0.2   -0.2 0.2 -1.1
auxotrophy YNB Glucose 75mM Methionine 0.2   -0.4 0.1 -0.8
auxotrophy YNB Glucose -0.1   -0.2 0.1 -0.5
auxotrophy Dropout Complete 0.1   0.2 -0.2 -0.8
growth on ricinoleic acid YNB Glucose 0.0   -0.2 -0.2 -0.3
facs on lipid accumulation Sorted No BODIPY Gate -0.1   -0.3 0.0 -0.2
growth on ricinoleic acid YNB Methylricinoleic Acid 0.1   0.0 -0.0 -0.6
ypd buoyancy 40 hrs Low Buoyancy -0.0   -0.1 0.1 -0.3
growth on ypd YPD -0.3   0.1 -0.4 0.3
growth on oleic acid YNB Oleic Acid 0.4   0.3 -0.4 -0.6
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.3   -0.0 0.2 -0.0
ypd buoyancy 40 hrs Median Buoyancy 0.0   -0.2 0.2 -0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.2   0.2 -0.1 0.2
ypd buoyancy 40 hrs High Buoyancy 0.0   -0.0 0.2 0.2
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