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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_5265: 13633 - K18749 LSM14, RAP55, SCD6 protein LSM14, at 311622 to 313606
13633
mRNA_5266: 13634 - K03262 EIF5 translation initiation factor 5, at 315096 to 316635
13634
mRNA_5267: 13635 - KOG2504 Monocarboxylate transporter, at 317317 to 318833
13635
mRNA_5268: 13636 - K10389 TUBG tubulin gamma, at 319582 to 321853
13636
mRNA_5269: 13637 - K03320 amt, AMT, MEP ammonium transporter, Amt family, at 322459 to 324944
13637
Group
Condition
mRNA_5265
mRNA_5266
mRNA_5267
mRNA_5268
mRNA_5269
13633
13634
13635
13636
13637
growth on oleic acid
YNB Glucose
-0.3
0.1
-0.3
facs on lipid accumulation
Sorted No BODIPY Gate
-0.0
-0.1
-0.3
growth on ypd
YPD
-0.2
-0.3
0.1
facs on lipid accumulation
Sorted High BODIPY Gate
-0.2
0.2
-0.2
ypd buoyancy
40 hrs No Buoyancy Separation
-0.3
0.4
-0.4
facs on lipid accumulation
Sorted Low BODIPY Gate
0.4
-0.3
-0.4
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.0
-0.1
-0.2
auxotrophy
YNB Glucose 75mM Arginine
0.2
-0.1
-0.2
ypd buoyancy
40 hrs Median Buoyancy
0.0
0.0
-0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.2
-0.3
-0.0
auxotrophy
YNB Glucose
0.2
-0.1
-0.2
auxotrophy
YNB Glucose 75mM Methionine
0.1
0.2
-0.4
ypd buoyancy
40 hrs Low Buoyancy
0.1
-0.0
-0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.0
-0.2
0.2
ypd buoyancy
40 hrs High Buoyancy
0.0
0.0
-0.0
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.3
-0.1
-0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
0.9
-0.4
-0.0
auxotrophy
Dropout Complete
0.4
0.1
0.2
growth on ricinoleic acid
YNB Glucose
0.8
0.0
-0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
0.7
0.1
0.0
growth on oleic acid
YNB Oleic Acid
0.3
0.4
0.3
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