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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_5261: 13629 - K01173 ENDOG endonuclease G, mitochondrial, at 304388 to 306039
13629
mRNA_5262: 13630 - K00161 PDHA, pdhA pyruvate dehydrogenase E1 component alpha subunit, at 306876 to 308801
13630
mRNA_5263: 13631 - BLAST pyruvate dehydrogenase E1 component subunit alpha [Mi..., at 309267 to 309581
13631
mRNA_5264: 13632 - Hypothetical Protein, at 310145 to 311167
13632
mRNA_5265: 13633 - K18749 LSM14, RAP55, SCD6 protein LSM14, at 311622 to 313606
13633
Group
Condition
mRNA_5261
mRNA_5262
mRNA_5263
mRNA_5264
mRNA_5265
13629
13630
13631
13632
13633
growth on ypd
YPD
-0.0
-0.5
-0.2
growth on oleic acid
YNB Glucose
-0.1
-0.2
-0.3
ypd buoyancy
40 hrs Median Buoyancy
0.1
-0.5
0.0
ypd buoyancy
40 hrs No Buoyancy Separation
0.1
-0.3
-0.3
auxotrophy
YNB Glucose 75mM Methionine
-0.2
-0.3
0.1
ypd buoyancy
40 hrs Low Buoyancy
0.1
-0.5
0.1
auxotrophy
YNB Glucose
0.0
-0.3
0.2
auxotrophy
YNB Glucose 75mM Arginine
-0.0
-0.3
0.2
ypd buoyancy
40 hrs High Buoyancy
0.0
0.1
0.0
facs on lipid accumulation
Sorted No BODIPY Gate
-0.3
0.4
-0.0
auxotrophy
Dropout Complete
0.0
-0.2
0.4
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.3
-0.1
0.0
growth on oleic acid
YNB Oleic Acid
-0.2
0.2
0.3
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.3
-0.1
-0.0
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.2
-0.1
0.2
facs on lipid accumulation
Sorted High BODIPY Gate
0.1
0.4
-0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.2
-0.3
0.9
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.1
-0.1
0.7
growth on ricinoleic acid
YNB Glucose
-0.1
-0.2
0.8
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.1
0.3
0.3
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.0
0.3
0.4
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