Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_5258: 13626 - KOG0538 Glycolate oxidase, at 297725 to 299742 13626 mRNA_5259: 13627 - K01424 E3.5.1.1, ansA, ansB L-asparaginase, at 300162 to 301995 13627 mRNA_5260: 13628 - K02263 COX4 cytochrome c oxidase subunit 4, at 302752 to 303807 13628 mRNA_5261: 13629 - K01173 ENDOG endonuclease G, mitochondrial, at 304388 to 306039 13629 mRNA_5262: 13630 - K00161 PDHA, pdhA pyruvate dehydrogenase E1 component alpha subunit, at 306876 to 308801 13630
Group Condition mRNA_5258 mRNA_5259 mRNA_5260 mRNA_5261 mRNA_5262
13626
13627
13628
13629
13630
facs on lipid accumulation Sorted Low BODIPY Gate -0.8 -0.5      
facs on lipid accumulation Sorted High BODIPY Gate -0.4 -0.7      
auxotrophy YNB Glucose 75mM Arginine -0.4 -0.7      
facs on lipid accumulation Sorted No BODIPY Gate -0.4 -0.5      
auxotrophy Dropout Complete -0.3 -0.4      
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.4 -0.3      
growth on oleic acid YNB Oleic Acid -0.3 -0.5      
growth on ypd YPD -0.4 -0.3      
auxotrophy YNB Glucose 75mM Methionine -0.1 -0.5      
growth on oleic acid YNB Glucose -0.3 -0.3      
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.4 -0.1      
growth on ricinoleic acid YNB Methylricinoleic Acid 0.2 -0.6      
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.3 -0.1      
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.3 0.1      
growth on ricinoleic acid YNB Glucose 0.2 -0.4      
auxotrophy YNB Glucose 0.1 -0.3      
growth on ricinoleic acid YNB Ricinoleic Acid -0.0 -0.1      
ypd buoyancy 40 hrs High Buoyancy 0.2 0.2      
ypd buoyancy 40 hrs No Buoyancy Separation 0.5 -0.0      
ypd buoyancy 40 hrs Low Buoyancy 0.4 0.4      
ypd buoyancy 40 hrs Median Buoyancy 0.4 0.4      
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