Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_5256: 13624 - SUPERFAMILY--SSF53448, at 292144 to 293863 13624 mRNA_5257: 13625 - K11887 PAAF1, RPN14 proteasomal ATPase-associated factor 1, at 295850 to 297525 13625 mRNA_5258: 13626 - KOG0538 Glycolate oxidase, at 297725 to 299742 13626 mRNA_5259: 13627 - K01424 E3.5.1.1, ansA, ansB L-asparaginase, at 300162 to 301995 13627 mRNA_5260: 13628 - K02263 COX4 cytochrome c oxidase subunit 4, at 302752 to 303807 13628
Group Condition mRNA_5256 mRNA_5257 mRNA_5258 mRNA_5259 mRNA_5260
13624
13625
13626
13627
13628
facs on lipid accumulation Sorted High BODIPY Gate -0.7 0.2 -0.4 -0.7  
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.5 -0.5 -0.4 -0.1  
auxotrophy YNB Glucose 75mM Arginine 0.3 -0.2 -0.4 -0.7  
facs on lipid accumulation Sorted No BODIPY Gate -0.3 0.3 -0.4 -0.5  
auxotrophy Dropout Complete 0.0 -0.1 -0.3 -0.4  
auxotrophy YNB Glucose 75mM Methionine -0.1 -0.1 -0.1 -0.5  
growth on oleic acid YNB Oleic Acid 0.3 -0.3 -0.3 -0.5  
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.4 -0.6 -0.3 -0.1  
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.8 -0.5 -0.4 -0.3  
facs on lipid accumulation Sorted Low BODIPY Gate 0.7 0.4 -0.8 -0.5  
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 1.2 -0.9 -0.3 0.1  
growth on oleic acid YNB Glucose 0.5 0.1 -0.3 -0.3  
ypd buoyancy 40 hrs High Buoyancy 0.1 -0.1 0.2 0.2  
growth on ypd YPD 0.5 0.5 -0.4 -0.3  
auxotrophy YNB Glucose 0.7 0.2 0.1 -0.3  
ypd buoyancy 40 hrs Low Buoyancy 0.2 -0.1 0.4 0.4  
growth on ricinoleic acid YNB Glucose 1.0 0.4 0.2 -0.4  
ypd buoyancy 40 hrs Median Buoyancy 0.3 0.1 0.4 0.4  
ypd buoyancy 40 hrs No Buoyancy Separation 1.2 -0.3 0.5 -0.0  
growth on ricinoleic acid YNB Methylricinoleic Acid 1.7 0.3 0.2 -0.6  
growth on ricinoleic acid YNB Ricinoleic Acid 1.5 0.2 -0.0 -0.1  
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