Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_5247: 13615 - HMMPfam-Basic region leucine zipper-PF07716,ProSitePatterns-Basic-leucine zipper (bZIP) domain signature.-PS00036,ProSiteProfiles-Basic-leucine zipper (bZIP) domain profile.-PS50217,SMART-basic region leucin zipper-SM00338,SUPERFAMILY--SSF57959, at 256939 to 258074 13615 mRNA_5248: 13616 - KOG2084 Predicted histone tail methylase containing SET domain, at 258879 to 260199 13616 mRNA_5249: 13617 - K01535 PMA1, PMA2 H+-transporting ATPase, at 260649 to 264628 13617 mRNA_5250: 13618 - SUPERFAMILY--SSF101898, at 267361 to 271776 13618 mRNA_5251: 13619 - K12867 SYF1, XAB2 pre-mRNA-splicing factor SYF1, at 271974 to 275743 13619
Group Condition mRNA_5247 mRNA_5248 mRNA_5249 mRNA_5250 mRNA_5251
13615
13616
13617
13618
13619
auxotrophy YNB Glucose -0.5 -0.3   0.1 -1.5
auxotrophy Dropout Complete -0.4 -0.2   0.1 -1.2
auxotrophy YNB Glucose 75mM Arginine -0.2 -0.0   0.1 -1.2
auxotrophy YNB Glucose 75mM Methionine -0.5 -0.1   0.1 -0.8
ypd buoyancy 40 hrs High Buoyancy -0.0 -0.3   -0.1 -0.9
growth on ypd YPD 0.3 -0.2   0.0 -1.3
growth on ricinoleic acid YNB Ricinoleic Acid -0.0 0.3   -0.0 -1.3
facs on lipid accumulation Sorted High BODIPY Gate 0.2 -0.3   -0.1 -0.8
ypd buoyancy 40 hrs Low Buoyancy 0.3 -0.5   -0.1 -0.7
facs on lipid accumulation Sorted No BODIPY Gate -0.2 0.1   0.2 -1.0
growth on oleic acid YNB Oleic Acid -0.1 -0.2   -0.1 -0.6
facs on lipid accumulation Sorted Low BODIPY Gate 0.0 0.2   0.2 -1.1
growth on ricinoleic acid YNB Glucose -0.0 0.2   0.0 -0.5
ypd buoyancy 40 hrs No Buoyancy Separation 0.5 -0.3   -0.3 0.1
ypd buoyancy 40 hrs Median Buoyancy 0.2 -0.4   0.2 -0.1
growth on oleic acid YNB Glucose -0.0 0.0   -0.1 0.2
growth on ricinoleic acid YNB Methylricinoleic Acid 0.0 0.2   0.1 -0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.4 -0.1   0.1 1.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.2 -0.1   0.1 0.7
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.1 -0.0   0.2 0.5
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.2 -0.1   0.2 1.5
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