Private Fitness
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
500 nt
mRNA_5244: 13612 - HMMPfam-Glycosyl Hydrolase Family 88-PF07470,SUPERFAMILY--SSF48208, at 251965 to 253364
13612
mRNA_5245: 13613 - KOG2887 Membrane protein involved in ER to Golgi transport, at 253942 to 254889
13613
mRNA_5246: 13614 - K00411 UQCRFS1, RIP1, petA ubiquinol-cytochrome c reductase iron-sulfur subunit, at 255112 to 256642
13614
mRNA_5247: 13615 - HMMPfam-Basic region leucine zipper-PF07716,ProSitePatterns-Basic-leucine zipper (bZIP) domain signature.-PS00036,ProSiteProfiles-Basic-leucine zipper (bZIP) domain profile.-PS50217,SMART-basic region leucin zipper-SM00338,SUPERFAMILY--SSF57959, at 256939 to 258074
13615
mRNA_5248: 13616 - KOG2084 Predicted histone tail methylase containing SET domain, at 258879 to 260199
13616
Group
Condition
mRNA_5244
mRNA_5245
mRNA_5246
mRNA_5247
mRNA_5248
13612
13613
13614
13615
13616
facs on lipid accumulation
Sorted High BODIPY Gate
-0.3
-1.3
0.2
-0.3
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.9
-0.2
-0.4
-0.1
auxotrophy
YNB Glucose 75mM Methionine
-0.1
-0.1
-0.5
-0.1
facs on lipid accumulation
Sorted No BODIPY Gate
-0.1
-0.4
-0.2
0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.1
-0.4
-0.2
-0.1
auxotrophy
YNB Glucose
0.0
0.1
-0.5
-0.3
growth on oleic acid
YNB Oleic Acid
-0.1
-0.1
-0.1
-0.2
growth on ricinoleic acid
YNB Glucose
-0.1
-0.6
-0.0
0.2
growth on oleic acid
YNB Glucose
-0.2
-0.2
-0.0
0.0
ypd buoyancy
40 hrs Median Buoyancy
-0.2
-0.1
0.2
-0.4
auxotrophy
YNB Glucose 75mM Arginine
-0.1
0.0
-0.2
-0.0
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.3
-0.3
0.0
0.2
auxotrophy
Dropout Complete
-0.0
0.3
-0.4
-0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.1
-0.4
-0.0
0.3
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.3
0.0
0.1
-0.0
ypd buoyancy
40 hrs High Buoyancy
-0.3
0.5
-0.0
-0.3
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.1
0.3
-0.2
-0.1
growth on ypd
YPD
-0.3
0.2
0.3
-0.2
ypd buoyancy
40 hrs No Buoyancy Separation
-0.3
0.1
0.5
-0.3
ypd buoyancy
40 hrs Low Buoyancy
-0.1
0.7
0.3
-0.5
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.3
1.5
0.0
0.2
remove
mRNA_5244
plot
remove
mRNA_5245
plot
remove
mRNA_5246
remove
mRNA_5247
plot
remove
mRNA_5248
plot