Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_5237: 13605 - K02914 RP-L34, MRPL34, rpmH large subunit ribosomal protein L34, at 234183 to 234602 13605 mRNA_5238: 13606 - KOG1199 Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase, at 235141 to 236473 13606 mRNA_5239: 13607 - K10859 ALKBH2 alpha-ketoglutarate-dependent dioxygenase alkB homolog 2, at 236624 to 237646 13607 mRNA_5240: 13608 - HMMPfam-Ubiquinol-cytochrome-c reductase complex subunit (QCR10)-PF09796, at 238020 to 238702 13608 mRNA_5241: 13609 - K01099 INPP5B_F inositol polyphosphate 5-phosphatase INPP5B/F, at 238987 to 242229 13609
Group Condition mRNA_5237 mRNA_5238 mRNA_5239 mRNA_5240 mRNA_5241
13605
13606
13607
13608
13609
ypd buoyancy 40 hrs Low Buoyancy   -0.2 -0.3 -0.3 -0.1
ypd buoyancy 40 hrs No Buoyancy Separation   -0.1 -0.3 -0.9 0.3
facs on lipid accumulation Sorted Low BODIPY Gate   -0.3 0.4 -0.6 -0.4
growth on oleic acid YNB Oleic Acid   -0.2 -0.4 -0.2 -0.1
growth on ricinoleic acid YNB Ricinoleic Acid   0.0 -0.5 0.0 -0.4
growth on ypd YPD   0.1 -0.5 0.3 -0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation   0.6 -0.3 -0.6 -0.0
facs on lipid accumulation Sorted No BODIPY Gate   0.2 -0.6 0.3 -0.2
growth on oleic acid YNB Glucose   0.1 -0.1 -0.2 -0.0
facs on lipid accumulation Sorted High BODIPY Gate   0.6 -0.4 0.1 -0.4
ypd buoyancy 40 hrs Median Buoyancy   -0.0 -0.0 -0.1 0.2
ypd buoyancy 40 hrs High Buoyancy   0.2 -0.1 -0.3 0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy   0.4 -0.1 -0.3 0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy   0.6 -0.2 -0.3 0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy   0.3 0.0 -0.3 0.0
auxotrophy YNB Glucose 75mM Methionine   -0.1 0.2 0.3 -0.2
growth on ricinoleic acid YNB Methylricinoleic Acid   0.8 -0.2 -0.1 -0.1
auxotrophy Dropout Complete   0.3 -0.2 0.6 -0.1
growth on ricinoleic acid YNB Glucose   0.5 0.1 0.1 -0.1
auxotrophy YNB Glucose   0.4 0.2 0.3 -0.1
auxotrophy YNB Glucose 75mM Arginine   0.5 0.3 0.7 -0.1
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