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Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Number of genes on each side:
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_5235: 13603 - KOG1178 Non-ribosomal peptide synthetase/alpha-aminoadipate reductase and related enzymes, at 226852 to 231804
13603
mRNA_5236: 13604 - KOG2031 Tyrosyl-DNA phosphodiesterase, at 232008 to 233871
13604
mRNA_5237: 13605 - K02914 RP-L34, MRPL34, rpmH large subunit ribosomal protein L34, at 234183 to 234602
13605
mRNA_5238: 13606 - KOG1199 Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase, at 235141 to 236473
13606
mRNA_5239: 13607 - K10859 ALKBH2 alpha-ketoglutarate-dependent dioxygenase alkB homolog 2, at 236624 to 237646
13607
Group
Condition
mRNA_5235
mRNA_5236
mRNA_5237
mRNA_5238
mRNA_5239
13603
13604
13605
13606
13607
ypd buoyancy
40 hrs Low Buoyancy
0.0
-0.6
-0.2
-0.3
ypd buoyancy
40 hrs No Buoyancy Separation
-0.1
-0.2
-0.1
-0.3
growth on oleic acid
YNB Oleic Acid
-0.1
0.1
-0.2
-0.4
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.1
0.1
0.0
-0.5
ypd buoyancy
40 hrs Median Buoyancy
-0.1
-0.3
-0.0
-0.0
facs on lipid accumulation
Sorted No BODIPY Gate
0.1
-0.1
0.2
-0.6
ypd buoyancy
40 hrs High Buoyancy
-0.3
-0.1
0.2
-0.1
auxotrophy
YNB Glucose 75mM Methionine
-0.1
-0.2
-0.1
0.2
growth on oleic acid
YNB Glucose
0.2
-0.3
0.1
-0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.4
-0.0
0.6
-0.2
growth on ypd
YPD
-0.2
0.6
0.1
-0.5
auxotrophy
Dropout Complete
-0.0
-0.1
0.3
-0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.2
-0.1
0.3
0.0
facs on lipid accumulation
Sorted High BODIPY Gate
0.1
-0.2
0.6
-0.4
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.1
-0.0
0.6
-0.3
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.1
0.2
-0.3
0.4
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.1
0.0
0.4
-0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.1
-0.2
0.8
-0.2
auxotrophy
YNB Glucose
-0.1
0.3
0.4
0.2
auxotrophy
YNB Glucose 75mM Arginine
-0.0
0.3
0.5
0.3
growth on ricinoleic acid
YNB Glucose
0.1
0.4
0.5
0.1
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