Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_5235: 13603 - KOG1178 Non-ribosomal peptide synthetase/alpha-aminoadipate reductase and related enzymes, at 226852 to 231804 13603 mRNA_5236: 13604 - KOG2031 Tyrosyl-DNA phosphodiesterase, at 232008 to 233871 13604 mRNA_5237: 13605 - K02914 RP-L34, MRPL34, rpmH large subunit ribosomal protein L34, at 234183 to 234602 13605 mRNA_5238: 13606 - KOG1199 Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase, at 235141 to 236473 13606 mRNA_5239: 13607 - K10859 ALKBH2 alpha-ketoglutarate-dependent dioxygenase alkB homolog 2, at 236624 to 237646 13607
Group Condition mRNA_5235 mRNA_5236 mRNA_5237 mRNA_5238 mRNA_5239
13603
13604
13605
13606
13607
ypd buoyancy 40 hrs Low Buoyancy 0.0 -0.6   -0.2 -0.3
ypd buoyancy 40 hrs No Buoyancy Separation -0.1 -0.2   -0.1 -0.3
growth on oleic acid YNB Oleic Acid -0.1 0.1   -0.2 -0.4
growth on ricinoleic acid YNB Ricinoleic Acid -0.1 0.1   0.0 -0.5
ypd buoyancy 40 hrs Median Buoyancy -0.1 -0.3   -0.0 -0.0
facs on lipid accumulation Sorted No BODIPY Gate 0.1 -0.1   0.2 -0.6
ypd buoyancy 40 hrs High Buoyancy -0.3 -0.1   0.2 -0.1
auxotrophy YNB Glucose 75mM Methionine -0.1 -0.2   -0.1 0.2
growth on oleic acid YNB Glucose 0.2 -0.3   0.1 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.4 -0.0   0.6 -0.2
growth on ypd YPD -0.2 0.6   0.1 -0.5
auxotrophy Dropout Complete -0.0 -0.1   0.3 -0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.2 -0.1   0.3 0.0
facs on lipid accumulation Sorted High BODIPY Gate 0.1 -0.2   0.6 -0.4
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 -0.0   0.6 -0.3
facs on lipid accumulation Sorted Low BODIPY Gate -0.1 0.2   -0.3 0.4
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 0.0   0.4 -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 -0.2   0.8 -0.2
auxotrophy YNB Glucose -0.1 0.3   0.4 0.2
auxotrophy YNB Glucose 75mM Arginine -0.0 0.3   0.5 0.3
growth on ricinoleic acid YNB Glucose 0.1 0.4   0.5 0.1
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