Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_5231: 13599 - Hypothetical Protein, at 216501 to 218178 13599 mRNA_5232: 13600 - SUPERFAMILY--SSF52047, at 218691 to 220745 13600 mRNA_5233: 13601 - HMMPfam-Transmembrane amino acid transporter protein-PF01490, at 221714 to 224141 13601 mRNA_5234: 13602 - KOG0725 Reductases with broad range of substrate specificities, at 224900 to 226337 13602 mRNA_5235: 13603 - KOG1178 Non-ribosomal peptide synthetase/alpha-aminoadipate reductase and related enzymes, at 226852 to 231804 13603
Group Condition mRNA_5231 mRNA_5232 mRNA_5233 mRNA_5234 mRNA_5235
13599
13600
13601
13602
13603
growth on ypd YPD 0.1 0.2 -0.0 -0.8 -0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.0 -0.1 -0.0 -0.4 -0.1
facs on lipid accumulation Sorted High BODIPY Gate -0.1 -1.0 -0.1 0.8 0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.0 -0.0 -0.1 0.2 -0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.1 -0.1 0.0 0.5 -0.4
ypd buoyancy 40 hrs High Buoyancy -0.0 0.1 0.5 -0.1 -0.3
facs on lipid accumulation Sorted Low BODIPY Gate -0.2 0.3 -0.0 0.3 -0.1
facs on lipid accumulation Sorted No BODIPY Gate 0.1 -0.1 -0.2 0.5 0.1
auxotrophy Dropout Complete 0.1 -0.1 0.1 0.3 -0.0
growth on oleic acid YNB Oleic Acid 0.2 -0.0 0.1 0.4 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.0 0.2 -0.1 0.5 -0.1
auxotrophy YNB Glucose 75mM Methionine 0.4 -0.2 -0.1 0.6 -0.1
auxotrophy YNB Glucose 75mM Arginine 0.2 0.1 0.2 0.2 -0.0
ypd buoyancy 40 hrs Median Buoyancy 0.1 0.1 0.5 0.2 -0.1
growth on oleic acid YNB Glucose -0.0 0.0 0.0 0.6 0.2
ypd buoyancy 40 hrs No Buoyancy Separation -0.3 0.2 0.3 0.8 -0.1
auxotrophy YNB Glucose 0.4 -0.1 0.2 0.7 -0.1
ypd buoyancy 40 hrs Low Buoyancy 0.0 0.3 0.8 0.4 0.0
growth on ricinoleic acid YNB Glucose 0.1 0.2 0.1 1.2 0.1
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 0.4 0.4 1.2 -0.1
growth on ricinoleic acid YNB Ricinoleic Acid 0.1 0.3 0.3 1.7 -0.1
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