Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_5214: 13582 - K03845 ALG3 alpha-1,3-mannosyltransferase, at 164395 to 166467 13582 mRNA_5215: 13583 - KOG1940 Zn-finger protein, at 166614 to 167435 13583 mRNA_5217: 13585 - Hypothetical Protein, at 167751 to 168514 13585 mRNA_5216: 13584 - K04648 DCTN1 dynactin 1, at 169213 to 174465 13584 mRNA_5218: 13586 - HMMPfam-RNA12 protein-PF10443,SUPERFAMILY--SSF52540,SUPERFAMILY--SSF54928, at 174597 to 177713 13586
Group Condition mRNA_5214 mRNA_5215 mRNA_5217 mRNA_5216 mRNA_5218
13582
13583
13585
13584
13586
growth on ricinoleic acid YNB Methylricinoleic Acid -0.5 -0.7 -0.3 0.1 0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 0.4 -0.3 -0.3 -0.1
auxotrophy YNB Glucose 75mM Methionine -0.2 -0.3 0.4 -0.1 -0.2
auxotrophy Dropout Complete -0.0 -0.2 0.2 -0.0 -0.2
ypd buoyancy 40 hrs No Buoyancy Separation -0.3 0.2 1.0 -0.9 -0.1
auxotrophy YNB Glucose -0.1 0.2 0.1 -0.0 -0.2
ypd buoyancy 40 hrs Median Buoyancy 0.0 -0.2 0.2 -0.2 0.2
ypd buoyancy 40 hrs Low Buoyancy 0.2 0.2 0.3 -1.0 0.2
growth on ricinoleic acid YNB Ricinoleic Acid -1.3 0.2 -0.1 0.6 0.7
growth on oleic acid YNB Oleic Acid 0.4 -0.1 -0.3 0.3 -0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.2 0.2 -0.1 0.0 0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.1 0.6 -0.5 0.2 -0.3
auxotrophy YNB Glucose 75mM Arginine -0.2 0.1 0.4 0.3 -0.3
growth on ypd YPD 0.1 0.1 0.2 -0.5 0.3
growth on oleic acid YNB Glucose 0.3 -0.3 -0.1 0.3 0.0
growth on ricinoleic acid YNB Glucose -0.2 0.3 -0.1 0.3 0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 0.4 0.0 0.5 -0.2
ypd buoyancy 40 hrs High Buoyancy 0.1 -0.3 0.2 0.6 0.0
facs on lipid accumulation Sorted No BODIPY Gate -0.2 0.3 0.6 0.4 -0.1
facs on lipid accumulation Sorted Low BODIPY Gate -0.0 0.8 0.8 0.8 -0.1
facs on lipid accumulation Sorted High BODIPY Gate -0.1 1.1 0.1 0.8 0.3
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