Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_5205: 13573 - KOG0001 Ubiquitin and ubiquitin-like proteins, at 148303 to 148964 13573 mRNA_5206: 13574 - HMMPfam-Ubiquitin family-PF00240,ProSiteProfiles-Ubiquitin domain profile.-PS50053,SMART-Ubiquitin homologues-SM00213,SUPERFAMILY--SSF54236, at 149878 to 151168 13574 mRNA_5207: 13575 - KOG0001 Ubiquitin and ubiquitin-like proteins, at 152184 to 152471 13575 mRNA_5208: 13576 - Hypothetical Protein, at 152507 to 152935 13576 mRNA_5209: 13577 - K03257 EIF4A translation initiation factor 4A, at 153381 to 155810 13577
Group Condition mRNA_5205 mRNA_5206 mRNA_5207 mRNA_5208 mRNA_5209
13573
13574
13575
13576
13577
growth on oleic acid YNB Glucose -0.5 0.0   -0.3  
growth on ricinoleic acid YNB Glucose -0.1 -0.5   -0.2  
growth on ricinoleic acid YNB Methylricinoleic Acid 0.4 -0.4   -0.6  
auxotrophy YNB Glucose 75mM Arginine -0.4 -0.3   0.1  
growth on ricinoleic acid YNB Ricinoleic Acid 0.5 -0.6   -0.1  
facs on lipid accumulation Sorted High BODIPY Gate 0.1 -0.5   0.3  
growth on oleic acid YNB Oleic Acid -0.0 0.0   -0.1  
facs on lipid accumulation Sorted No BODIPY Gate -0.2 -0.1   0.2  
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.6 -0.1   -0.4  
ypd buoyancy 40 hrs Low Buoyancy 0.3 0.0   -0.3  
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.5 -0.1   -0.3  
auxotrophy YNB Glucose -0.0 -0.3   0.5  
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.8 0.1   -0.7  
ypd buoyancy 40 hrs No Buoyancy Separation 0.2 -0.0   0.2  
growth on ypd YPD 0.0 -0.2   0.4  
ypd buoyancy 40 hrs Median Buoyancy 0.3 0.2   -0.1  
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.9 0.0   -0.4  
facs on lipid accumulation Sorted Low BODIPY Gate 0.1 -0.1   0.6  
ypd buoyancy 40 hrs High Buoyancy 0.2 0.2   0.1  
auxotrophy YNB Glucose 75mM Methionine 0.1 0.3   0.2  
auxotrophy Dropout Complete 0.0 0.2   0.4  
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