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Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_5205: 13573 - KOG0001 Ubiquitin and ubiquitin-like proteins, at 148303 to 148964
13573
mRNA_5206: 13574 - HMMPfam-Ubiquitin family-PF00240,ProSiteProfiles-Ubiquitin domain profile.-PS50053,SMART-Ubiquitin homologues-SM00213,SUPERFAMILY--SSF54236, at 149878 to 151168
13574
mRNA_5207: 13575 - KOG0001 Ubiquitin and ubiquitin-like proteins, at 152184 to 152471
13575
mRNA_5208: 13576 - Hypothetical Protein, at 152507 to 152935
13576
mRNA_5209: 13577 - K03257 EIF4A translation initiation factor 4A, at 153381 to 155810
13577
Group
Condition
mRNA_5205
mRNA_5206
mRNA_5207
mRNA_5208
mRNA_5209
13573
13574
13575
13576
13577
growth on oleic acid
YNB Glucose
-0.5
0.0
-0.3
growth on ricinoleic acid
YNB Glucose
-0.1
-0.5
-0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
0.4
-0.4
-0.6
auxotrophy
YNB Glucose 75mM Arginine
-0.4
-0.3
0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
0.5
-0.6
-0.1
facs on lipid accumulation
Sorted High BODIPY Gate
0.1
-0.5
0.3
growth on oleic acid
YNB Oleic Acid
-0.0
0.0
-0.1
facs on lipid accumulation
Sorted No BODIPY Gate
-0.2
-0.1
0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.6
-0.1
-0.4
ypd buoyancy
40 hrs Low Buoyancy
0.3
0.0
-0.3
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.5
-0.1
-0.3
auxotrophy
YNB Glucose
-0.0
-0.3
0.5
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.8
0.1
-0.7
ypd buoyancy
40 hrs No Buoyancy Separation
0.2
-0.0
0.2
growth on ypd
YPD
0.0
-0.2
0.4
ypd buoyancy
40 hrs Median Buoyancy
0.3
0.2
-0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.9
0.0
-0.4
facs on lipid accumulation
Sorted Low BODIPY Gate
0.1
-0.1
0.6
ypd buoyancy
40 hrs High Buoyancy
0.2
0.2
0.1
auxotrophy
YNB Glucose 75mM Methionine
0.1
0.3
0.2
auxotrophy
Dropout Complete
0.0
0.2
0.4
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