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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_5198: 13566 - KOG2614 Kynurenine 3-monooxygenase and related flavoprotein monooxygenases, at 131412 to 133498
13566
mRNA_5199: 13567 - K01210 E3.2.1.58 glucan 1,3-beta-glucosidase, at 133607 to 137030
13567
mRNA_5200: 13568 - Hypothetical Protein, at 137334 to 138235
13568
mRNA_5201: 13569 - K02304 MET8 precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase, at 139005 to 139988
13569
mRNA_5202: 13570 - K02874 RP-L14, MRPL14, rplN large subunit ribosomal protein L14, at 140296 to 141028
13570
Group
Condition
mRNA_5198
mRNA_5199
mRNA_5200
mRNA_5201
mRNA_5202
13566
13567
13568
13569
13570
auxotrophy
YNB Glucose
0.4
-0.2
-0.3
-3.1
auxotrophy
YNB Glucose 75mM Arginine
0.4
-0.1
-0.2
-2.7
growth on oleic acid
YNB Glucose
-0.1
-0.4
0.0
-2.1
growth on ricinoleic acid
YNB Glucose
0.1
-0.1
-0.3
-2.0
facs on lipid accumulation
Sorted High BODIPY Gate
0.6
0.4
0.1
-3.4
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.1
0.7
-0.0
-2.6
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.0
0.5
-0.2
-1.9
facs on lipid accumulation
Sorted No BODIPY Gate
0.6
0.1
0.0
-2.3
growth on ricinoleic acid
YNB Methylricinoleic Acid
0.0
0.2
0.1
-1.7
growth on ricinoleic acid
YNB Ricinoleic Acid
0.4
0.3
-0.1
-1.3
ypd buoyancy
40 hrs No Buoyancy Separation
0.3
0.1
-0.1
-0.8
growth on oleic acid
YNB Oleic Acid
0.1
0.2
0.1
-0.7
growth on ypd
YPD
0.0
0.0
0.4
-0.8
ypd buoyancy
40 hrs Median Buoyancy
0.0
0.2
0.1
-0.4
auxotrophy
YNB Glucose 75mM Methionine
0.4
-0.3
-0.2
0.5
facs on lipid accumulation
Sorted Low BODIPY Gate
0.3
0.2
0.6
-0.5
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.2
0.9
-0.1
-0.4
auxotrophy
Dropout Complete
0.1
0.1
-0.3
1.0
ypd buoyancy
40 hrs High Buoyancy
0.0
0.2
0.3
0.3
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.2
0.6
-0.3
0.7
ypd buoyancy
40 hrs Low Buoyancy
-0.1
0.4
0.1
0.7
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