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Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_5196: 13564 - K17218 sqr sulfide-quinone oxidoreductase, at 126891 to 128997
13564
mRNA_5197: 13565 - Hypothetical Protein, at 129115 to 130730
13565
mRNA_5198: 13566 - KOG2614 Kynurenine 3-monooxygenase and related flavoprotein monooxygenases, at 131412 to 133498
13566
mRNA_5199: 13567 - K01210 E3.2.1.58 glucan 1,3-beta-glucosidase, at 133607 to 137030
13567
mRNA_5200: 13568 - Hypothetical Protein, at 137334 to 138235
13568
Group
Condition
mRNA_5196
mRNA_5197
mRNA_5198
mRNA_5199
mRNA_5200
13564
13565
13566
13567
13568
auxotrophy
YNB Glucose
-0.4
-0.2
0.4
-0.2
-0.3
growth on oleic acid
YNB Glucose
-0.2
-0.0
-0.1
-0.4
0.0
auxotrophy
Dropout Complete
-0.2
-0.2
0.1
0.1
-0.3
growth on ricinoleic acid
YNB Glucose
-0.2
-0.0
0.1
-0.1
-0.3
auxotrophy
YNB Glucose 75mM Arginine
-0.5
-0.0
0.4
-0.1
-0.2
auxotrophy
YNB Glucose 75mM Methionine
-0.2
-0.1
0.4
-0.3
-0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.5
-0.1
0.4
0.3
-0.1
ypd buoyancy
40 hrs Low Buoyancy
-0.1
-0.3
-0.1
0.4
0.1
growth on oleic acid
YNB Oleic Acid
-0.1
-0.1
0.1
0.2
0.1
growth on ypd
YPD
0.1
-0.3
0.0
0.0
0.4
ypd buoyancy
40 hrs Median Buoyancy
0.1
-0.2
0.0
0.2
0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.6
0.1
0.1
0.7
-0.0
ypd buoyancy
40 hrs No Buoyancy Separation
-0.0
0.1
0.3
0.1
-0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.1
0.2
0.0
0.2
0.1
ypd buoyancy
40 hrs High Buoyancy
0.0
-0.2
0.0
0.2
0.3
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.1
0.1
0.2
0.6
-0.3
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.2
-0.1
0.3
0.2
0.6
facs on lipid accumulation
Sorted No BODIPY Gate
-0.2
0.1
0.6
0.1
0.0
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.5
0.2
-0.0
0.5
-0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.2
0.2
0.2
0.9
-0.1
facs on lipid accumulation
Sorted High BODIPY Gate
0.1
0.2
0.6
0.4
0.1
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