Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_5193: 13561 - KOG0253 Synaptic vesicle transporter SV2 (major facilitator superfamily), at 119123 to 121882 13561 mRNA_5194: 13562 - K00002 AKR1A1, adh alcohol dehydrogenase (NADP+), at 122774 to 124635 13562 mRNA_5195: 13563 - KOG0814 Glyoxylase, at 125333 to 126456 13563 mRNA_5196: 13564 - K17218 sqr sulfide-quinone oxidoreductase, at 126891 to 128997 13564 mRNA_5197: 13565 - Hypothetical Protein, at 129115 to 130730 13565
Group Condition mRNA_5193 mRNA_5194 mRNA_5195 mRNA_5196 mRNA_5197
13561
13562
13563
13564
13565
facs on lipid accumulation Sorted Low BODIPY Gate 0.6 0.1 -3.8 -0.2 -0.1
facs on lipid accumulation Sorted No BODIPY Gate 0.2 -0.4 -1.7 -0.2 0.1
facs on lipid accumulation Sorted High BODIPY Gate 0.7 -0.2 -2.4 0.1 0.2
ypd buoyancy 40 hrs No Buoyancy Separation -0.9 0.4 -0.6 -0.0 0.1
ypd buoyancy 40 hrs Low Buoyancy 0.1 -0.3 -0.4 -0.1 -0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.1 -0.3 0.0 -0.6 0.1
growth on ricinoleic acid YNB Ricinoleic Acid -0.7 0.7 0.2 -0.5 -0.1
ypd buoyancy 40 hrs High Buoyancy -0.4 0.1 0.2 0.0 -0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 -0.2 -0.1 0.1 0.1
ypd buoyancy 40 hrs Median Buoyancy 0.3 -0.1 -0.2 0.1 -0.2
auxotrophy Dropout Complete 0.1 0.5 -0.0 -0.2 -0.2
auxotrophy YNB Glucose 0.2 0.5 0.1 -0.4 -0.2
growth on ricinoleic acid YNB Methylricinoleic Acid -0.7 0.3 0.5 -0.1 0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.1 -0.2 -0.2 0.5 0.2
growth on ypd YPD -0.1 0.3 0.4 0.1 -0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.2 -0.2 0.1 0.2 0.2
auxotrophy YNB Glucose 75mM Methionine 0.2 0.6 -0.1 -0.2 -0.1
growth on ricinoleic acid YNB Glucose -0.1 0.5 0.4 -0.2 -0.0
growth on oleic acid YNB Oleic Acid 0.2 0.3 0.1 -0.1 -0.1
auxotrophy YNB Glucose 75mM Arginine 0.4 0.5 0.3 -0.5 -0.0
growth on oleic acid YNB Glucose 0.4 0.6 0.3 -0.2 -0.0
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