Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_5189: 13557 - K14290 XPO1, CRM1 exportin-1, at 109082 to 113752 13557 mRNA_5190: 13558 - KOG4157 beta-1,6-N-acetylglucosaminyltransferase, contains WSC domain, at 114138 to 116063 13558 mRNA_5191: 13559 - KOG4826 C-8,7 sterol isomerase, at 116613 to 117622 13559 mRNA_5192: 13560 - KOG2814 Transcription coactivator complex, P50 component (LigT RNA ligase/phosphodiesterase family), at 117744 to 118664 13560 mRNA_5193: 13561 - KOG0253 Synaptic vesicle transporter SV2 (major facilitator superfamily), at 119123 to 121882 13561
Group Condition mRNA_5189 mRNA_5190 mRNA_5191 mRNA_5192 mRNA_5193
13557
13558
13559
13560
13561
growth on ricinoleic acid YNB Methylricinoleic Acid     -0.1 -0.4 -0.7
growth on oleic acid YNB Oleic Acid     0.1 -1.5 0.2
ypd buoyancy 40 hrs High Buoyancy     -0.1 -0.4 -0.4
growth on ricinoleic acid YNB Ricinoleic Acid     -0.2 -0.1 -0.7
auxotrophy Dropout Complete     -0.2 -0.7 0.1
growth on oleic acid YNB Glucose     0.0 -1.0 0.4
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation     -0.2 -0.3 0.2
growth on ypd YPD     -0.4 0.2 -0.1
growth on ricinoleic acid YNB Glucose     -0.0 -0.2 -0.1
auxotrophy YNB Glucose 75mM Arginine     -0.1 -0.5 0.4
auxotrophy YNB Glucose     0.1 -0.5 0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy     -0.2 0.0 0.1
auxotrophy YNB Glucose 75mM Methionine     -0.0 -0.3 0.2
facs on lipid accumulation Sorted No BODIPY Gate     0.2 -0.3 0.2
ypd buoyancy 40 hrs Low Buoyancy     -0.4 0.4 0.1
facs on lipid accumulation Sorted Low BODIPY Gate     0.4 -0.9 0.6
buoyancy on lipid accumulation 40 hrs High Buoyancy     -0.1 0.6 -0.1
ypd buoyancy 40 hrs No Buoyancy Separation     -0.2 1.5 -0.9
buoyancy on lipid accumulation 40 hrs Low Buoyancy     0.1 0.5 0.1
ypd buoyancy 40 hrs Median Buoyancy     -0.3 0.7 0.3
facs on lipid accumulation Sorted High BODIPY Gate     0.2 1.0 0.7
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