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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_5188: 13556 - HMMPfam-Protein of unknown function (DUF3421)-PF11901,SMART-Repeats found in Drosophila proteins.-SM00696, at 107668 to 108466
13556
mRNA_5189: 13557 - K14290 XPO1, CRM1 exportin-1, at 109082 to 113752
13557
mRNA_5190: 13558 - KOG4157 beta-1,6-N-acetylglucosaminyltransferase, contains WSC domain, at 114138 to 116063
13558
mRNA_5191: 13559 - KOG4826 C-8,7 sterol isomerase, at 116613 to 117622
13559
mRNA_5192: 13560 - KOG2814 Transcription coactivator complex, P50 component (LigT RNA ligase/phosphodiesterase family), at 117744 to 118664
13560
Group
Condition
mRNA_5188
mRNA_5189
mRNA_5190
mRNA_5191
mRNA_5192
13556
13557
13558
13559
13560
growth on oleic acid
YNB Oleic Acid
-0.3
0.1
-1.5
auxotrophy
Dropout Complete
-0.7
-0.2
-0.7
growth on oleic acid
YNB Glucose
-0.0
0.0
-1.0
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.5
-0.2
-0.1
auxotrophy
YNB Glucose 75mM Methionine
-0.5
-0.0
-0.3
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.1
-0.1
-0.4
auxotrophy
YNB Glucose 75mM Arginine
-0.1
-0.1
-0.5
auxotrophy
YNB Glucose
-0.3
0.1
-0.5
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.0
-0.2
-0.3
growth on ricinoleic acid
YNB Glucose
-0.2
-0.0
-0.2
growth on ypd
YPD
-0.1
-0.4
0.2
facs on lipid accumulation
Sorted Low BODIPY Gate
0.2
0.4
-0.9
ypd buoyancy
40 hrs High Buoyancy
0.3
-0.1
-0.4
facs on lipid accumulation
Sorted No BODIPY Gate
-0.1
0.2
-0.3
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.1
-0.2
0.0
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.4
-0.1
0.6
ypd buoyancy
40 hrs Low Buoyancy
0.2
-0.4
0.4
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.2
0.1
0.5
ypd buoyancy
40 hrs Median Buoyancy
0.2
-0.3
0.7
facs on lipid accumulation
Sorted High BODIPY Gate
-0.3
0.2
1.0
ypd buoyancy
40 hrs No Buoyancy Separation
0.6
-0.2
1.5
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