Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_5187: 13555 - KOG2533 Permease of the major facilitator superfamily, at 103886 to 106875 13555 mRNA_5188: 13556 - HMMPfam-Protein of unknown function (DUF3421)-PF11901,SMART-Repeats found in Drosophila proteins.-SM00696, at 107668 to 108466 13556 mRNA_5189: 13557 - K14290 XPO1, CRM1 exportin-1, at 109082 to 113752 13557 mRNA_5190: 13558 - KOG4157 beta-1,6-N-acetylglucosaminyltransferase, contains WSC domain, at 114138 to 116063 13558 mRNA_5191: 13559 - KOG4826 C-8,7 sterol isomerase, at 116613 to 117622 13559
Group Condition mRNA_5187 mRNA_5188 mRNA_5189 mRNA_5190 mRNA_5191
13555
13556
13557
13558
13559
auxotrophy Dropout Complete -0.5 -0.7     -0.2
growth on ricinoleic acid YNB Ricinoleic Acid -0.3 -0.5     -0.2
auxotrophy YNB Glucose 75mM Methionine -0.3 -0.5     -0.0
growth on ricinoleic acid YNB Methylricinoleic Acid -0.5 -0.1     -0.1
auxotrophy YNB Glucose -0.5 -0.3     0.1
growth on ypd YPD -0.1 -0.1     -0.4
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.4 -0.0     -0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 -0.4     -0.1
auxotrophy YNB Glucose 75mM Arginine -0.4 -0.1     -0.1
growth on ricinoleic acid YNB Glucose -0.3 -0.2     -0.0
facs on lipid accumulation Sorted High BODIPY Gate -0.4 -0.3     0.2
ypd buoyancy 40 hrs No Buoyancy Separation -0.8 0.6     -0.2
ypd buoyancy 40 hrs Low Buoyancy -0.2 0.2     -0.4
growth on oleic acid YNB Oleic Acid -0.2 -0.3     0.1
growth on oleic acid YNB Glucose -0.3 -0.0     0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.2 -0.2     0.1
ypd buoyancy 40 hrs Median Buoyancy -0.1 0.2     -0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 0.1     -0.2
ypd buoyancy 40 hrs High Buoyancy -0.0 0.3     -0.1
facs on lipid accumulation Sorted No BODIPY Gate 0.3 -0.1     0.2
facs on lipid accumulation Sorted Low BODIPY Gate 0.1 0.2     0.4
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