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Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_5162: 13530 - Hypothetical Protein, at 46391 to 47176
13530
mRNA_5163: 13531 - Hypothetical Protein, at 48190 to 49744
13531
mRNA_5164: 13532 - HMMPfam-Beta-lactamase superfamily domain-PF12706,SMART-Metallo-beta-lactamase superfamily-SM00849,SUPERFAMILY--SSF56281, at 50171 to 51821
13532
mRNA_5165: 13533 - Hypothetical Protein, at 52326 to 52658
13533
mRNA_5166: 13534 - KOG0590 Checkpoint kinase and related serine/threonine protein kinases, at 53307 to 58220
13534
Group
Condition
mRNA_5162
mRNA_5163
mRNA_5164
mRNA_5165
mRNA_5166
13530
13531
13532
13533
13534
facs on lipid accumulation
Sorted Low BODIPY Gate
0.2
0.4
-1.3
0.1
0.0
auxotrophy
Dropout Complete
-0.6
0.3
-0.6
0.0
0.4
ypd buoyancy
40 hrs High Buoyancy
0.3
0.1
-0.5
-0.1
-0.1
facs on lipid accumulation
Sorted High BODIPY Gate
0.2
0.0
-0.8
0.0
0.2
growth on ricinoleic acid
YNB Glucose
-0.2
-0.0
-0.2
0.0
0.1
auxotrophy
YNB Glucose 75mM Arginine
-0.4
0.4
-0.5
-0.1
0.4
auxotrophy
YNB Glucose
-0.5
0.3
-0.5
-0.1
0.6
facs on lipid accumulation
Sorted No BODIPY Gate
0.2
0.3
-0.5
0.0
-0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.2
0.2
0.1
0.0
-0.0
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.1
0.1
-0.5
0.0
0.6
ypd buoyancy
40 hrs Median Buoyancy
0.2
-0.1
0.0
0.0
0.1
auxotrophy
YNB Glucose 75mM Methionine
-0.2
0.3
-0.3
-0.0
0.5
ypd buoyancy
40 hrs Low Buoyancy
0.2
0.1
0.2
0.1
-0.2
ypd buoyancy
40 hrs No Buoyancy Separation
0.8
-0.1
-0.1
-0.1
0.0
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.3
0.4
0.3
-0.0
0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.3
0.5
-0.5
0.1
0.8
growth on oleic acid
YNB Glucose
-0.3
0.2
0.3
-0.0
0.3
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.1
0.3
0.3
0.0
0.1
growth on oleic acid
YNB Oleic Acid
0.1
0.3
0.2
-0.0
0.1
growth on ypd
YPD
0.1
0.1
0.4
0.0
0.0
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.1
0.4
-0.0
0.3
0.5
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