Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_5162: 13530 - Hypothetical Protein, at 46391 to 47176 13530 mRNA_5163: 13531 - Hypothetical Protein, at 48190 to 49744 13531 mRNA_5164: 13532 - HMMPfam-Beta-lactamase superfamily domain-PF12706,SMART-Metallo-beta-lactamase superfamily-SM00849,SUPERFAMILY--SSF56281, at 50171 to 51821 13532 mRNA_5165: 13533 - Hypothetical Protein, at 52326 to 52658 13533 mRNA_5166: 13534 - KOG0590 Checkpoint kinase and related serine/threonine protein kinases, at 53307 to 58220 13534
Group Condition mRNA_5162 mRNA_5163 mRNA_5164 mRNA_5165 mRNA_5166
13530
13531
13532
13533
13534
facs on lipid accumulation Sorted Low BODIPY Gate 0.2 0.4 -1.3 0.1 0.0
auxotrophy Dropout Complete -0.6 0.3 -0.6 0.0 0.4
ypd buoyancy 40 hrs High Buoyancy 0.3 0.1 -0.5 -0.1 -0.1
facs on lipid accumulation Sorted High BODIPY Gate 0.2 0.0 -0.8 0.0 0.2
growth on ricinoleic acid YNB Glucose -0.2 -0.0 -0.2 0.0 0.1
auxotrophy YNB Glucose 75mM Arginine -0.4 0.4 -0.5 -0.1 0.4
auxotrophy YNB Glucose -0.5 0.3 -0.5 -0.1 0.6
facs on lipid accumulation Sorted No BODIPY Gate 0.2 0.3 -0.5 0.0 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.2 0.2 0.1 0.0 -0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 0.1 -0.5 0.0 0.6
ypd buoyancy 40 hrs Median Buoyancy 0.2 -0.1 0.0 0.0 0.1
auxotrophy YNB Glucose 75mM Methionine -0.2 0.3 -0.3 -0.0 0.5
ypd buoyancy 40 hrs Low Buoyancy 0.2 0.1 0.2 0.1 -0.2
ypd buoyancy 40 hrs No Buoyancy Separation 0.8 -0.1 -0.1 -0.1 0.0
growth on ricinoleic acid YNB Methylricinoleic Acid -0.3 0.4 0.3 -0.0 0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.3 0.5 -0.5 0.1 0.8
growth on oleic acid YNB Glucose -0.3 0.2 0.3 -0.0 0.3
growth on ricinoleic acid YNB Ricinoleic Acid -0.1 0.3 0.3 0.0 0.1
growth on oleic acid YNB Oleic Acid 0.1 0.3 0.2 -0.0 0.1
growth on ypd YPD 0.1 0.1 0.4 0.0 0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 0.4 -0.0 0.3 0.5
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