Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_5155: 13523 - BLAST unknown [Tremella fuciformis], at 30718 to 32151 13523 mRNA_5156: 13524 - K00108 betA, CHDH choline dehydrogenase, at 32964 to 35897 13524 mRNA_5157: 13525 - K11976 RNF216 TRIAD3 E3 ubiquitin-protein ligase RNF216, at 36318 to 38711 13525 mRNA_5158: 13526 - K15128 MED6 mediator of RNA polymerase II transcription subunit 6, at 39677 to 40567 13526 mRNA_5159: 13527 - Hypothetical Protein, at 41390 to 42543 13527
Group Condition mRNA_5155 mRNA_5156 mRNA_5157 mRNA_5158 mRNA_5159
13523
13524
13525
13526
13527
ypd buoyancy 40 hrs No Buoyancy Separation -1.2 0.5 -0.5   -0.2
ypd buoyancy 40 hrs Median Buoyancy -0.4 -0.1 0.1   -0.0
ypd buoyancy 40 hrs High Buoyancy -0.2 -0.0 -0.1   0.1
facs on lipid accumulation Sorted Low BODIPY Gate 0.1 -0.2 0.2   -0.1
auxotrophy Dropout Complete 0.4 0.0 -0.0   -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.3 0.3 0.1   -0.2
facs on lipid accumulation Sorted High BODIPY Gate 0.0 0.1 0.6   -0.2
growth on oleic acid YNB Glucose 0.2 0.3 0.2   -0.1
growth on ricinoleic acid YNB Glucose 0.3 0.1 0.1   0.1
auxotrophy YNB Glucose 75mM Methionine 0.7 0.2 -0.2   -0.1
ypd buoyancy 40 hrs Low Buoyancy 0.0 0.2 0.4   0.0
facs on lipid accumulation Sorted No BODIPY Gate 0.4 -0.0 0.3   0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.6 0.2 -0.1   0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.7 0.0 -0.1   0.3
growth on oleic acid YNB Oleic Acid 0.8 0.3 0.3   -0.4
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.6 0.2 -0.2   0.3
growth on ypd YPD 0.2 -0.0 0.1   0.7
growth on ricinoleic acid YNB Methylricinoleic Acid 1.0 -0.1 0.2   -0.0
auxotrophy YNB Glucose 75mM Arginine 0.8 -0.0 0.3   0.0
auxotrophy YNB Glucose 0.7 0.1 0.2   0.1
growth on ricinoleic acid YNB Ricinoleic Acid 1.4 -0.1 0.3   0.1
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