Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_5153: 13521 - HMMPfam-Secretory lipase-PF03583,PIRSF--PIRSF029171,ProSiteProfiles-Prokaryotic membrane lipoprotein lipid attachment site profile.-PS51257,SUPERFAMILY--SSF53474, at 26390 to 28027 13521 mRNA_5154: 13522 - HMMPfam-Beta-lactamase superfamily domain-PF12706,SUPERFAMILY--SSF56281, at 28775 to 30256 13522 mRNA_5155: 13523 - BLAST unknown [Tremella fuciformis], at 30718 to 32151 13523 mRNA_5156: 13524 - K00108 betA, CHDH choline dehydrogenase, at 32964 to 35897 13524 mRNA_5157: 13525 - K11976 RNF216 TRIAD3 E3 ubiquitin-protein ligase RNF216, at 36318 to 38711 13525
Group Condition mRNA_5153 mRNA_5154 mRNA_5155 mRNA_5156 mRNA_5157
13521
13522
13523
13524
13525
ypd buoyancy 40 hrs High Buoyancy -0.7 -0.2 -0.2 -0.0 -0.1
facs on lipid accumulation Sorted Low BODIPY Gate -1.0 -0.2 0.1 -0.2 0.2
ypd buoyancy 40 hrs Median Buoyancy -0.4 -0.2 -0.4 -0.1 0.1
ypd buoyancy 40 hrs No Buoyancy Separation 0.0 0.5 -1.2 0.5 -0.5
facs on lipid accumulation Sorted No BODIPY Gate -0.3 -0.1 0.4 -0.0 0.3
auxotrophy Dropout Complete 0.4 -0.4 0.4 0.0 -0.0
growth on ypd YPD 0.0 0.2 0.2 -0.0 0.1
growth on ricinoleic acid YNB Glucose 0.6 -0.2 0.3 0.1 0.1
auxotrophy YNB Glucose 75mM Arginine 0.0 -0.1 0.8 -0.0 0.3
ypd buoyancy 40 hrs Low Buoyancy 0.1 0.3 0.0 0.2 0.4
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.4 0.1 0.7 0.0 -0.1
auxotrophy YNB Glucose 75mM Methionine 0.5 0.1 0.7 0.2 -0.2
growth on oleic acid YNB Glucose 0.6 0.3 0.2 0.3 0.2
auxotrophy YNB Glucose 0.4 0.1 0.7 0.1 0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.7 0.3 0.3 0.3 0.1
facs on lipid accumulation Sorted High BODIPY Gate 0.7 0.3 0.0 0.1 0.6
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.8 0.3 0.6 0.2 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.6 0.6 0.6 0.2 -0.2
growth on ricinoleic acid YNB Methylricinoleic Acid 0.8 0.3 1.0 -0.1 0.2
growth on oleic acid YNB Oleic Acid 0.6 0.6 0.8 0.3 0.3
growth on ricinoleic acid YNB Ricinoleic Acid 0.8 0.9 1.4 -0.1 0.3
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