Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_5152: 13520 - HMMPfam-Domain of unknown function (DUF4336)-PF14234,SUPERFAMILY--SSF56281, at 24796 to 26164 13520 mRNA_5153: 13521 - HMMPfam-Secretory lipase-PF03583,PIRSF--PIRSF029171,ProSiteProfiles-Prokaryotic membrane lipoprotein lipid attachment site profile.-PS51257,SUPERFAMILY--SSF53474, at 26390 to 28027 13521 mRNA_5154: 13522 - HMMPfam-Beta-lactamase superfamily domain-PF12706,SUPERFAMILY--SSF56281, at 28775 to 30256 13522 mRNA_5155: 13523 - BLAST unknown [Tremella fuciformis], at 30718 to 32151 13523 mRNA_5156: 13524 - K00108 betA, CHDH choline dehydrogenase, at 32964 to 35897 13524
Group Condition mRNA_5152 mRNA_5153 mRNA_5154 mRNA_5155 mRNA_5156
13520
13521
13522
13523
13524
facs on lipid accumulation Sorted Low BODIPY Gate -0.0 -1.0 -0.2 0.1 -0.2
ypd buoyancy 40 hrs Median Buoyancy -0.1 -0.4 -0.2 -0.4 -0.1
ypd buoyancy 40 hrs High Buoyancy 0.1 -0.7 -0.2 -0.2 -0.0
ypd buoyancy 40 hrs No Buoyancy Separation 0.2 0.0 0.5 -1.2 0.5
facs on lipid accumulation Sorted No BODIPY Gate 0.0 -0.3 -0.1 0.4 -0.0
growth on ypd YPD 0.3 0.0 0.2 0.2 -0.0
ypd buoyancy 40 hrs Low Buoyancy 0.1 0.1 0.3 0.0 0.2
growth on ricinoleic acid YNB Glucose -0.1 0.6 -0.2 0.3 0.1
auxotrophy Dropout Complete 0.4 0.4 -0.4 0.4 0.0
auxotrophy YNB Glucose 75mM Arginine 0.3 0.0 -0.1 0.8 -0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.1 0.4 0.1 0.7 0.0
growth on oleic acid YNB Glucose 0.2 0.6 0.3 0.2 0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.2 0.7 0.3 0.3 0.3
auxotrophy YNB Glucose 75mM Methionine 0.3 0.5 0.1 0.7 0.2
auxotrophy YNB Glucose 0.4 0.4 0.1 0.7 0.1
facs on lipid accumulation Sorted High BODIPY Gate 0.7 0.7 0.3 0.0 0.1
growth on ricinoleic acid YNB Methylricinoleic Acid 0.0 0.8 0.3 1.0 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.3 0.6 0.6 0.6 0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.4 0.8 0.3 0.6 0.2
growth on oleic acid YNB Oleic Acid 0.2 0.6 0.6 0.8 0.3
growth on ricinoleic acid YNB Ricinoleic Acid 0.2 0.8 0.9 1.4 -0.1
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