Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_5151: 13519 - HMMPfam-SUR7/PalI family-PF06687, at 22943 to 24220 13519 mRNA_5152: 13520 - HMMPfam-Domain of unknown function (DUF4336)-PF14234,SUPERFAMILY--SSF56281, at 24796 to 26164 13520 mRNA_5153: 13521 - HMMPfam-Secretory lipase-PF03583,PIRSF--PIRSF029171,ProSiteProfiles-Prokaryotic membrane lipoprotein lipid attachment site profile.-PS51257,SUPERFAMILY--SSF53474, at 26390 to 28027 13521 mRNA_5154: 13522 - HMMPfam-Beta-lactamase superfamily domain-PF12706,SUPERFAMILY--SSF56281, at 28775 to 30256 13522 mRNA_5155: 13523 - BLAST unknown [Tremella fuciformis], at 30718 to 32151 13523
Group Condition mRNA_5151 mRNA_5152 mRNA_5153 mRNA_5154 mRNA_5155
13519
13520
13521
13522
13523
facs on lipid accumulation Sorted Low BODIPY Gate -0.9 -0.0 -1.0 -0.2 0.1
ypd buoyancy 40 hrs Median Buoyancy -0.2 -0.1 -0.4 -0.2 -0.4
ypd buoyancy 40 hrs No Buoyancy Separation -0.4 0.2 0.0 0.5 -1.2
ypd buoyancy 40 hrs High Buoyancy 0.2 0.1 -0.7 -0.2 -0.2
facs on lipid accumulation Sorted No BODIPY Gate 0.4 0.0 -0.3 -0.1 0.4
growth on ypd YPD 0.0 0.3 0.0 0.2 0.2
ypd buoyancy 40 hrs Low Buoyancy 0.7 0.1 0.1 0.3 0.0
auxotrophy Dropout Complete 0.4 0.4 0.4 -0.4 0.4
auxotrophy YNB Glucose 75mM Arginine 0.2 0.3 0.0 -0.1 0.8
growth on ricinoleic acid YNB Glucose 0.6 -0.1 0.6 -0.2 0.3
growth on oleic acid YNB Glucose 0.5 0.2 0.6 0.3 0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.3 0.2 0.7 0.3 0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.5 0.1 0.4 0.1 0.7
auxotrophy YNB Glucose 75mM Methionine 0.7 0.3 0.5 0.1 0.7
auxotrophy YNB Glucose 0.7 0.4 0.4 0.1 0.7
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.5 0.3 0.6 0.6 0.6
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.7 0.4 0.8 0.3 0.6
growth on ricinoleic acid YNB Methylricinoleic Acid 1.0 0.0 0.8 0.3 1.0
growth on oleic acid YNB Oleic Acid 1.1 0.2 0.6 0.6 0.8
facs on lipid accumulation Sorted High BODIPY Gate 1.9 0.7 0.7 0.3 0.0
growth on ricinoleic acid YNB Ricinoleic Acid 1.2 0.2 0.8 0.9 1.4
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