Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_5141: 13509 - K12198 CHMP5, VPS60 charged multivesicular body protein 5, at 1 to 752 13509 mRNA_5142: 13510 - K13577 SLC25A10, DIC solute carrier family 25 (mitochondrial dicarboxylate transporter), member 10, at 1705 to 3095 13510 mRNA_5143: 13511 - K12763 SOK2 protein SOK2, at 4212 to 7292 13511 mRNA_5144: 13512 - BLAST putative mit domain-containing protein [Erysiphe neca..., at 8147 to 8373 13512 mRNA_5145: 13513 - Hypothetical Protein, at 8823 to 11115 13513
Group Condition mRNA_5141 mRNA_5142 mRNA_5143 mRNA_5144 mRNA_5145
13509
13510
13511
13512
13513
ypd buoyancy 40 hrs No Buoyancy Separation -1.0 -0.5 -0.2 -0.9 -0.8
ypd buoyancy 40 hrs Median Buoyancy -0.3 -0.2 -0.1 -0.7 -0.2
ypd buoyancy 40 hrs High Buoyancy -0.3 -0.3 -0.1 -0.2 -0.0
growth on ypd YPD 0.4 0.1 -0.1 -0.3 0.1
ypd buoyancy 40 hrs Low Buoyancy -0.3 -0.1 -0.1 0.5 0.5
facs on lipid accumulation Sorted Low BODIPY Gate -0.3 1.4 0.1 -0.2 0.2
auxotrophy Dropout Complete -0.5 0.1 0.1 1.2 0.6
auxotrophy YNB Glucose 75mM Arginine -0.2 -0.2 -0.1 1.6 0.5
auxotrophy YNB Glucose -0.3 -0.2 0.1 1.5 0.5
growth on ricinoleic acid YNB Glucose 0.7 -0.2 0.1 0.9 0.5
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.7 0.6 -0.0 1.1 -0.4
auxotrophy YNB Glucose 75mM Methionine 0.0 0.0 -0.0 1.5 0.5
facs on lipid accumulation Sorted No BODIPY Gate 0.4 0.7 0.5 0.4 0.3
growth on oleic acid YNB Glucose 0.5 0.1 0.1 0.9 0.8
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.5 -0.3 -0.1 2.0 0.4
growth on ricinoleic acid YNB Methylricinoleic Acid 0.9 -0.3 -0.3 2.0 1.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.7 0.0 0.0 2.5 0.4
growth on oleic acid YNB Oleic Acid 1.1 0.2 0.0 1.8 1.2
buoyancy on lipid accumulation 40 hrs High Buoyancy 1.0 -0.1 0.1 2.6 0.9
facs on lipid accumulation Sorted High BODIPY Gate 0.6 1.0 0.3 1.7 1.4
growth on ricinoleic acid YNB Ricinoleic Acid 1.2 -0.1 -0.0 2.7 1.8
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