Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_5121: 13489 - K01137 GNS N-acetylglucosamine-6-sulfatase, at 1809104 to 1811514 13489 mRNA_5122: 13490 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701, at 1811957 to 1814516 13490 mRNA_5123: 13491 - K14826 FPR3_4 FK506-binding nuclear protein, at 1815032 to 1816842 13491 mRNA_5124: 13492 - K13248 PHOSPHO2 pyridoxal phosphate phosphatase PHOSPHO2, at 1816992 to 1818246 13492 mRNA_5125: 13493 - Interpro Protein of unknown function (DUF3431), at 1818424 to 1820541 13493
Group Condition mRNA_5121 mRNA_5122 mRNA_5123 mRNA_5124 mRNA_5125
13489
13490
13491
13492
13493
ypd buoyancy 40 hrs No Buoyancy Separation 0.2 -0.0 -0.1   -2.1
facs on lipid accumulation Sorted Low BODIPY Gate -0.1 0.2 -0.7   -1.4
ypd buoyancy 40 hrs High Buoyancy 0.2 -0.1 0.0   -0.7
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.6 0.2 -0.4   -0.8
growth on ypd YPD 0.2 0.1 -0.4   -0.1
facs on lipid accumulation Sorted No BODIPY Gate -0.1 0.4 -0.5   0.1
ypd buoyancy 40 hrs Median Buoyancy 0.1 -0.1 0.0   -0.1
facs on lipid accumulation Sorted High BODIPY Gate 0.1 0.4 -0.0   -0.5
growth on ricinoleic acid YNB Glucose -0.2 0.3 0.1   0.3
ypd buoyancy 40 hrs Low Buoyancy -0.0 0.1 0.0   0.5
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.6 0.4 0.4   -0.9
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.5 0.3 -0.0   -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.5 0.4 0.1   -0.3
auxotrophy YNB Glucose 75mM Methionine -0.2 0.1 0.5   0.3
auxotrophy YNB Glucose 75mM Arginine -0.1 0.2 0.5   0.5
growth on oleic acid YNB Glucose 0.2 0.2 0.2   0.5
auxotrophy YNB Glucose -0.2 0.4 0.4   0.6
auxotrophy Dropout Complete -0.3 0.0 0.7   0.8
growth on ricinoleic acid YNB Methylricinoleic Acid -0.4 0.4 0.9   1.0
growth on oleic acid YNB Oleic Acid 0.4 0.0 0.6   0.9
growth on ricinoleic acid YNB Ricinoleic Acid -0.4 0.5 0.6   1.4
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