Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_5120: 13488 - K11279 NAP1L1, NRP nucleosome assembly protein 1-like 1, at 1806857 to 1808752 13488 mRNA_5121: 13489 - K01137 GNS N-acetylglucosamine-6-sulfatase, at 1809104 to 1811514 13489 mRNA_5122: 13490 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701, at 1811957 to 1814516 13490 mRNA_5123: 13491 - K14826 FPR3_4 FK506-binding nuclear protein, at 1815032 to 1816842 13491 mRNA_5124: 13492 - K13248 PHOSPHO2 pyridoxal phosphate phosphatase PHOSPHO2, at 1816992 to 1818246 13492
Group Condition mRNA_5120 mRNA_5121 mRNA_5122 mRNA_5123 mRNA_5124
13488
13489
13490
13491
13492
facs on lipid accumulation Sorted Low BODIPY Gate   -0.1 0.2 -0.7  
facs on lipid accumulation Sorted No BODIPY Gate   -0.1 0.4 -0.5  
growth on ypd YPD   0.2 0.1 -0.4  
ypd buoyancy 40 hrs No Buoyancy Separation   0.2 -0.0 -0.1  
ypd buoyancy 40 hrs Low Buoyancy   -0.0 0.1 0.0  
ypd buoyancy 40 hrs Median Buoyancy   0.1 -0.1 0.0  
growth on ricinoleic acid YNB Glucose   -0.2 0.3 0.1  
ypd buoyancy 40 hrs High Buoyancy   0.2 -0.1 0.0  
auxotrophy Dropout Complete   -0.3 0.0 0.7  
buoyancy on lipid accumulation 40 hrs High Buoyancy   0.6 0.2 -0.4  
facs on lipid accumulation Sorted High BODIPY Gate   0.1 0.4 -0.0  
auxotrophy YNB Glucose 75mM Methionine   -0.2 0.1 0.5  
auxotrophy YNB Glucose   -0.2 0.4 0.4  
auxotrophy YNB Glucose 75mM Arginine   -0.1 0.2 0.5  
growth on oleic acid YNB Glucose   0.2 0.2 0.2  
growth on ricinoleic acid YNB Ricinoleic Acid   -0.4 0.5 0.6  
buoyancy on lipid accumulation 40 hrs Median Buoyancy   0.5 0.3 -0.0  
growth on ricinoleic acid YNB Methylricinoleic Acid   -0.4 0.4 0.9  
growth on oleic acid YNB Oleic Acid   0.4 0.0 0.6  
buoyancy on lipid accumulation 40 hrs Low Buoyancy   0.5 0.4 0.1  
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation   0.6 0.4 0.4  
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