Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_5119: 13487 - HMMPfam-LysM domain-PF01476,SMART-Lysin motif-SM00257,SUPERFAMILY--SSF54106, at 1804045 to 1805977 13487 mRNA_5120: 13488 - K11279 NAP1L1, NRP nucleosome assembly protein 1-like 1, at 1806857 to 1808752 13488 mRNA_5121: 13489 - K01137 GNS N-acetylglucosamine-6-sulfatase, at 1809104 to 1811514 13489 mRNA_5122: 13490 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701, at 1811957 to 1814516 13490 mRNA_5123: 13491 - K14826 FPR3_4 FK506-binding nuclear protein, at 1815032 to 1816842 13491
Group Condition mRNA_5119 mRNA_5120 mRNA_5121 mRNA_5122 mRNA_5123
13487
13488
13489
13490
13491
facs on lipid accumulation Sorted Low BODIPY Gate -1.0   -0.1 0.2 -0.7
ypd buoyancy 40 hrs Low Buoyancy -0.4   -0.0 0.1 0.0
facs on lipid accumulation Sorted No BODIPY Gate 0.1   -0.1 0.4 -0.5
growth on ypd YPD 0.0   0.2 0.1 -0.4
ypd buoyancy 40 hrs Median Buoyancy -0.1   0.1 -0.1 0.0
facs on lipid accumulation Sorted High BODIPY Gate -0.4   0.1 0.4 -0.0
growth on ricinoleic acid YNB Glucose 0.0   -0.2 0.3 0.1
ypd buoyancy 40 hrs High Buoyancy 0.0   0.2 -0.1 0.0
ypd buoyancy 40 hrs No Buoyancy Separation 0.2   0.2 -0.0 -0.1
growth on ricinoleic acid YNB Ricinoleic Acid -0.3   -0.4 0.5 0.6
growth on oleic acid YNB Glucose -0.1   0.2 0.2 0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.3   0.6 0.2 -0.4
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.2   0.5 0.4 0.1
auxotrophy YNB Glucose 0.3   -0.2 0.4 0.4
growth on ricinoleic acid YNB Methylricinoleic Acid 0.0   -0.4 0.4 0.9
auxotrophy Dropout Complete 0.6   -0.3 0.0 0.7
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.3   0.5 0.3 -0.0
auxotrophy YNB Glucose 75mM Arginine 0.5   -0.1 0.2 0.5
auxotrophy YNB Glucose 75mM Methionine 0.7   -0.2 0.1 0.5
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.2   0.6 0.4 0.4
growth on oleic acid YNB Oleic Acid 0.5   0.4 0.0 0.6
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