Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_5080: 13448 - K12486 SMAP stromal membrane-associated protein, at 1699891 to 1701497 13448 mRNA_5081: 13449 - K10396 KIF5 kinesin family member 5, at 1701702 to 1705465 13449 mRNA_5082: 13450 - K10696 BRE1 E3 ubiquitin-protein ligase BRE1, at 1706172 to 1709244 13450 mRNA_5083: 13451 - Hypothetical Protein, at 1709855 to 1711486 13451 mRNA_5084: 13452 - Hypothetical Protein, at 1712081 to 1713113 13452
Group Condition mRNA_5080 mRNA_5081 mRNA_5082 mRNA_5083 mRNA_5084
13448
13449
13450
13451
13452
ypd buoyancy 40 hrs No Buoyancy Separation -3.5 -0.3 -2.0 -1.2 -0.3
facs on lipid accumulation Sorted Low BODIPY Gate -1.6 -0.0 -2.7 -2.4 2.1
facs on lipid accumulation Sorted No BODIPY Gate -0.4 -0.1 -1.9 -0.1 -0.3
facs on lipid accumulation Sorted High BODIPY Gate -0.1 -0.2 -0.3 0.6 -2.0
growth on ricinoleic acid YNB Glucose -0.2 -0.2 -1.2 -0.2 -0.1
ypd buoyancy 40 hrs High Buoyancy -0.8 -0.1 -0.1 -0.2 -0.2
auxotrophy YNB Glucose 75mM Methionine -0.7 -0.3 -0.0 -0.0 -0.1
ypd buoyancy 40 hrs Low Buoyancy -0.0 -0.1 -0.7 -0.2 0.1
ypd buoyancy 40 hrs Median Buoyancy -0.5 -0.3 0.3 -0.4 0.1
growth on oleic acid YNB Oleic Acid -0.5 -0.4 0.2 0.2 -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid 0.4 0.3 -0.6 -0.5 -0.2
auxotrophy YNB Glucose 0.1 -0.4 -0.4 0.1 0.1
growth on ricinoleic acid YNB Ricinoleic Acid 0.3 0.5 -0.2 -0.6 -0.4
auxotrophy YNB Glucose 75mM Arginine -0.0 0.1 -0.5 0.1 0.1
growth on oleic acid YNB Glucose -0.1 -0.2 0.2 -0.1 -0.1
auxotrophy Dropout Complete 0.3 0.2 -0.3 -0.4 0.3
growth on ypd YPD 0.1 -0.1 0.6 -0.4 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy 1.6 -0.3 -0.2 0.8 -0.8
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 1.2 -0.6 -0.1 0.5 0.4
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.5 -0.6 1.0 0.7 0.4
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.9 0.2 0.0 0.3 1.6
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