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Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_5080: 13448 - K12486 SMAP stromal membrane-associated protein, at 1699891 to 1701497
13448
mRNA_5081: 13449 - K10396 KIF5 kinesin family member 5, at 1701702 to 1705465
13449
mRNA_5082: 13450 - K10696 BRE1 E3 ubiquitin-protein ligase BRE1, at 1706172 to 1709244
13450
mRNA_5083: 13451 - Hypothetical Protein, at 1709855 to 1711486
13451
mRNA_5084: 13452 - Hypothetical Protein, at 1712081 to 1713113
13452
Group
Condition
mRNA_5080
mRNA_5081
mRNA_5082
mRNA_5083
mRNA_5084
13448
13449
13450
13451
13452
ypd buoyancy
40 hrs No Buoyancy Separation
-3.5
-0.3
-2.0
-1.2
-0.3
facs on lipid accumulation
Sorted Low BODIPY Gate
-1.6
-0.0
-2.7
-2.4
2.1
facs on lipid accumulation
Sorted No BODIPY Gate
-0.4
-0.1
-1.9
-0.1
-0.3
facs on lipid accumulation
Sorted High BODIPY Gate
-0.1
-0.2
-0.3
0.6
-2.0
growth on ricinoleic acid
YNB Glucose
-0.2
-0.2
-1.2
-0.2
-0.1
ypd buoyancy
40 hrs High Buoyancy
-0.8
-0.1
-0.1
-0.2
-0.2
auxotrophy
YNB Glucose 75mM Methionine
-0.7
-0.3
-0.0
-0.0
-0.1
ypd buoyancy
40 hrs Low Buoyancy
-0.0
-0.1
-0.7
-0.2
0.1
ypd buoyancy
40 hrs Median Buoyancy
-0.5
-0.3
0.3
-0.4
0.1
growth on oleic acid
YNB Oleic Acid
-0.5
-0.4
0.2
0.2
-0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
0.4
0.3
-0.6
-0.5
-0.2
auxotrophy
YNB Glucose
0.1
-0.4
-0.4
0.1
0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
0.3
0.5
-0.2
-0.6
-0.4
auxotrophy
YNB Glucose 75mM Arginine
-0.0
0.1
-0.5
0.1
0.1
growth on oleic acid
YNB Glucose
-0.1
-0.2
0.2
-0.1
-0.1
auxotrophy
Dropout Complete
0.3
0.2
-0.3
-0.4
0.3
growth on ypd
YPD
0.1
-0.1
0.6
-0.4
-0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
1.6
-0.3
-0.2
0.8
-0.8
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
1.2
-0.6
-0.1
0.5
0.4
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.5
-0.6
1.0
0.7
0.4
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.9
0.2
0.0
0.3
1.6
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