Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments

500 nt mRNA_5078: 13446 - K01870 IARS, ileS isoleucyl-tRNA synthetase, at 1694035 to 1697967 13446 mRNA_5079: 13447 - HMMPfam-TRAF-type zinc finger-PF02176,ProSiteProfiles-Zinc finger TRAF-type profile.-PS50145, at 1698116 to 1699686 13447 mRNA_5080: 13448 - K12486 SMAP stromal membrane-associated protein, at 1699891 to 1701497 13448 mRNA_5081: 13449 - K10396 KIF5 kinesin family member 5, at 1701702 to 1705465 13449 mRNA_5082: 13450 - K10696 BRE1 E3 ubiquitin-protein ligase BRE1, at 1706172 to 1709244 13450
Group Condition mRNA_5078 mRNA_5079 mRNA_5080 mRNA_5081 mRNA_5082
13446
13447
13448
13449
13450
ypd buoyancy 40 hrs No Buoyancy Separation   0.1 -3.5 -0.3 -2.0
facs on lipid accumulation Sorted Low BODIPY Gate   -0.3 -1.6 -0.0 -2.7
facs on lipid accumulation Sorted No BODIPY Gate   -0.7 -0.4 -0.1 -1.9
facs on lipid accumulation Sorted High BODIPY Gate   -1.1 -0.1 -0.2 -0.3
growth on ricinoleic acid YNB Glucose   0.1 -0.2 -0.2 -1.2
ypd buoyancy 40 hrs High Buoyancy   -0.4 -0.8 -0.1 -0.1
auxotrophy YNB Glucose 75mM Methionine   -0.2 -0.7 -0.3 -0.0
auxotrophy YNB Glucose   -0.4 0.1 -0.4 -0.4
auxotrophy YNB Glucose 75mM Arginine   -0.1 -0.0 0.1 -0.5
ypd buoyancy 40 hrs Low Buoyancy   0.2 -0.0 -0.1 -0.7
growth on oleic acid YNB Oleic Acid   0.3 -0.5 -0.4 0.2
growth on ricinoleic acid YNB Methylricinoleic Acid   -0.3 0.4 0.3 -0.6
ypd buoyancy 40 hrs Median Buoyancy   0.6 -0.5 -0.3 0.3
auxotrophy Dropout Complete   -0.1 0.3 0.2 -0.3
growth on ypd YPD   -0.4 0.1 -0.1 0.6
growth on oleic acid YNB Glucose   0.4 -0.1 -0.2 0.2
growth on ricinoleic acid YNB Ricinoleic Acid   -0.2 0.3 0.5 -0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation   0.3 1.2 -0.6 -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy   0.1 0.5 -0.6 1.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy   0.0 0.9 0.2 0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy   0.1 1.6 -0.3 -0.2
remove
mRNA_5078
plot
remove
mRNA_5079
plot
remove
mRNA_5080
remove
mRNA_5081
plot
remove
mRNA_5082
plot