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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_5075: 13443 - K00958 sat, met3 sulfate adenylyltransferase, at 1688216 to 1690274
13443
mRNA_5076: 13444 - K00588 E2.1.1.104 caffeoyl-CoA O-methyltransferase, at 1690451 to 1691745
13444
mRNA_5077: 13445 - KOG1663 O-methyltransferase, at 1692035 to 1693349
13445
mRNA_5078: 13446 - K01870 IARS, ileS isoleucyl-tRNA synthetase, at 1694035 to 1697967
13446
mRNA_5079: 13447 - HMMPfam-TRAF-type zinc finger-PF02176,ProSiteProfiles-Zinc finger TRAF-type profile.-PS50145, at 1698116 to 1699686
13447
Group
Condition
mRNA_5075
mRNA_5076
mRNA_5077
mRNA_5078
mRNA_5079
13443
13444
13445
13446
13447
growth on ricinoleic acid
YNB Ricinoleic Acid
-2.3
0.0
-1.5
-0.2
facs on lipid accumulation
Sorted No BODIPY Gate
-1.3
-0.8
-1.0
-0.7
auxotrophy
YNB Glucose
-2.4
0.0
-0.6
-0.4
facs on lipid accumulation
Sorted High BODIPY Gate
-0.6
-0.4
-1.2
-1.1
facs on lipid accumulation
Sorted Low BODIPY Gate
-1.4
-0.1
-1.5
-0.3
growth on ricinoleic acid
YNB Glucose
-2.6
-0.0
-0.2
0.1
auxotrophy
YNB Glucose 75mM Arginine
-2.1
-0.2
-0.3
-0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
-1.9
-0.0
-0.5
-0.3
growth on oleic acid
YNB Glucose
-2.2
-0.2
-0.2
0.4
growth on oleic acid
YNB Oleic Acid
-0.2
-0.5
-1.2
0.3
growth on ypd
YPD
-0.0
-0.3
-0.7
-0.4
auxotrophy
Dropout Complete
-0.1
-0.2
-0.8
-0.1
ypd buoyancy
40 hrs Low Buoyancy
-0.2
-0.0
-0.9
0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-3.0
0.2
2.0
0.0
ypd buoyancy
40 hrs No Buoyancy Separation
-0.3
-0.7
0.1
0.1
ypd buoyancy
40 hrs High Buoyancy
0.1
0.0
-0.3
-0.4
auxotrophy
YNB Glucose 75mM Methionine
0.2
-0.4
0.1
-0.2
ypd buoyancy
40 hrs Median Buoyancy
0.3
0.1
-1.0
0.6
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-1.5
0.2
2.2
0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.5
0.4
1.5
0.3
buoyancy on lipid accumulation
40 hrs High Buoyancy
1.1
0.4
0.1
0.1
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