Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments

500 nt mRNA_5071: 13439 - KOG3038 Histone acetyltransferase SAGA associated factor SGF29, at 1678198 to 1679552 13439 mRNA_5072: 13440 - K04534 GNAO, G-ALPHA-O guanine nucleotide-binding protein G(o) subunit alpha, at 1680797 to 1682258 13440 mRNA_5073: 13441 - K12843 PRPF3, PRP3 U4/U6 small nuclear ribonucleoprotein PRP3, at 1684335 to 1686538 13441 mRNA_5074: 13442 - KOG1426 FOG RCC1 domain, at 1686748 to 1688020 13442 mRNA_5075: 13443 - K00958 sat, met3 sulfate adenylyltransferase, at 1688216 to 1690274 13443
Group Condition mRNA_5071 mRNA_5072 mRNA_5073 mRNA_5074 mRNA_5075
13439
13440
13441
13442
13443
buoyancy on lipid accumulation 40 hrs Low Buoyancy -1.8 0.1   -0.2 -3.0
growth on ricinoleic acid YNB Glucose -0.2 -0.1   0.0 -2.6
growth on oleic acid YNB Glucose 0.3 -0.1   0.1 -2.2
auxotrophy YNB Glucose 0.3 0.2   0.3 -2.4
facs on lipid accumulation Sorted High BODIPY Gate -0.5 0.1   -0.1 -0.6
ypd buoyancy 40 hrs No Buoyancy Separation -0.2 -0.4   -0.2 -0.3
facs on lipid accumulation Sorted No BODIPY Gate 0.6 -0.0   -0.2 -1.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.5 0.1   -0.1 -1.5
growth on ricinoleic acid YNB Ricinoleic Acid 0.5 0.7   0.2 -2.3
auxotrophy YNB Glucose 75mM Arginine 0.5 0.6   0.2 -2.1
growth on ricinoleic acid YNB Methylricinoleic Acid 0.6 0.5   0.0 -1.9
facs on lipid accumulation Sorted Low BODIPY Gate 1.2 -0.4   -0.2 -1.4
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.7 -0.1   -0.3 -0.5
ypd buoyancy 40 hrs Median Buoyancy 0.2 -0.3   -0.3 0.3
growth on ypd YPD 0.1 -0.1   -0.0 -0.0
ypd buoyancy 40 hrs Low Buoyancy 0.0 0.3   -0.2 -0.2
ypd buoyancy 40 hrs High Buoyancy 0.3 0.3   -0.1 0.1
auxotrophy Dropout Complete 0.6 0.3   0.0 -0.1
growth on oleic acid YNB Oleic Acid 1.0 0.1   0.1 -0.2
auxotrophy YNB Glucose 75mM Methionine 0.6 0.4   0.1 0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy 1.6 0.2   0.2 1.1
remove
mRNA_5071
plot		 remove
mRNA_5072
plot		 remove
mRNA_5073		 remove
mRNA_5074
plot		 remove
mRNA_5075
plot