Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_5069: 13437 - KOG2317 Putative translation initiation inhibitor UK114/IBM1, at 1676038 to 1676601 13437 mRNA_5070: 13438 - KOG3346 Phosphatidylethanolamine binding protein, at 1676835 to 1677879 13438 mRNA_5071: 13439 - KOG3038 Histone acetyltransferase SAGA associated factor SGF29, at 1678198 to 1679552 13439 mRNA_5072: 13440 - K04534 GNAO, G-ALPHA-O guanine nucleotide-binding protein G(o) subunit alpha, at 1680797 to 1682258 13440 mRNA_5073: 13441 - K12843 PRPF3, PRP3 U4/U6 small nuclear ribonucleoprotein PRP3, at 1684335 to 1686538 13441
Group Condition mRNA_5069 mRNA_5070 mRNA_5071 mRNA_5072 mRNA_5073
13437
13438
13439
13440
13441
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.4   -1.8 0.1  
facs on lipid accumulation Sorted High BODIPY Gate -1.0   -0.5 0.1  
ypd buoyancy 40 hrs No Buoyancy Separation -0.3   -0.2 -0.4  
growth on ricinoleic acid YNB Glucose -0.3   -0.2 -0.1  
ypd buoyancy 40 hrs Low Buoyancy -0.7   0.0 0.3  
ypd buoyancy 40 hrs Median Buoyancy 0.0   0.2 -0.3  
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.6   0.7 -0.1  
facs on lipid accumulation Sorted Low BODIPY Gate -0.8   1.2 -0.4  
facs on lipid accumulation Sorted No BODIPY Gate -0.4   0.6 -0.0  
ypd buoyancy 40 hrs High Buoyancy -0.3   0.3 0.3  
auxotrophy YNB Glucose -0.3   0.3 0.2  
growth on ypd YPD 0.3   0.1 -0.1  
growth on oleic acid YNB Glucose 0.2   0.3 -0.1  
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.2   0.5 0.1  
auxotrophy Dropout Complete -0.3   0.6 0.3  
auxotrophy YNB Glucose 75mM Arginine -0.1   0.5 0.6  
auxotrophy YNB Glucose 75mM Methionine 0.2   0.6 0.4  
growth on ricinoleic acid YNB Ricinoleic Acid 0.1   0.5 0.7  
growth on ricinoleic acid YNB Methylricinoleic Acid 0.3   0.6 0.5  
growth on oleic acid YNB Oleic Acid 0.3   1.0 0.1  
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.3   1.6 0.2  
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