Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_5060: 13428 - HMMPfam-Glycosyl transferase family 2-PF00535,HMMPfam-Glycosyl transferase family 8-PF01501,HMMPfam-Glycosyl transferase 4-like domain-PF13579,SUPERFAMILY--SSF53448,SUPERFAMILY--SSF53756, at 1654681 to 1660965 13428 mRNA_5061: 13429 - K11414 SIRT4, SIR2L4 NAD-dependent deacetylase sirtuin 4, at 1661158 to 1662498 13429 mRNA_5062: 13430 - HMMPfam-Zinc-binding-PF12907,SUPERFAMILY--SSF118359, at 1662567 to 1663555 13430 mRNA_5063: 13431 - K10301 FBXO21 F-box protein 21, at 1663864 to 1665707 13431 mRNA_5064: 13432 - K00286 proC pyrroline-5-carboxylate reductase, at 1665955 to 1667428 13432
Group Condition mRNA_5060 mRNA_5061 mRNA_5062 mRNA_5063 mRNA_5064
13428
13429
13430
13431
13432
facs on lipid accumulation Sorted No BODIPY Gate -0.7 -0.3 -0.1 0.2  
ypd buoyancy 40 hrs No Buoyancy Separation -0.7 0.2 0.3 -0.8  
facs on lipid accumulation Sorted Low BODIPY Gate -0.7 -0.3 0.1 0.0  
growth on ricinoleic acid YNB Glucose 0.0 -0.6 0.1 -0.2  
facs on lipid accumulation Sorted High BODIPY Gate -0.3 -0.3 0.1 -0.0  
ypd buoyancy 40 hrs High Buoyancy -0.4 -0.1 0.2 -0.3  
auxotrophy Dropout Complete -0.3 -0.1 -0.2 0.0  
auxotrophy YNB Glucose -0.3 0.0 -0.0 0.1  
auxotrophy YNB Glucose 75mM Methionine -0.2 -0.0 -0.1 0.2  
ypd buoyancy 40 hrs Median Buoyancy -0.3 0.1 0.3 -0.2  
growth on oleic acid YNB Glucose 0.2 0.0 -0.2 -0.1  
auxotrophy YNB Glucose 75mM Arginine -0.3 0.1 -0.0 0.2  
growth on oleic acid YNB Oleic Acid -0.0 0.2 -0.2 0.1  
ypd buoyancy 40 hrs Low Buoyancy -0.3 -0.1 0.4 0.1  
growth on ricinoleic acid YNB Ricinoleic Acid 0.2 -0.2 0.0 0.1  
growth on ypd YPD 0.1 0.1 -0.0 0.1  
growth on ricinoleic acid YNB Methylricinoleic Acid 0.2 -0.5 0.1 0.5  
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.4 0.4 0.6 0.1  
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.0 0.3 0.6 0.2  
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.3 -0.0 0.5 0.4  
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.1 0.4 0.4 0.4  
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