Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_5058: 13426 - K07249 E1.2.1.36 retinal dehydrogenase, at 1650225 to 1652548 13426 mRNA_5059: 13427 - KOG0022 Alcohol dehydrogenase, class III, at 1652748 to 1654435 13427 mRNA_5060: 13428 - HMMPfam-Glycosyl transferase family 2-PF00535,HMMPfam-Glycosyl transferase family 8-PF01501,HMMPfam-Glycosyl transferase 4-like domain-PF13579,SUPERFAMILY--SSF53448,SUPERFAMILY--SSF53756, at 1654681 to 1660965 13428 mRNA_5061: 13429 - K11414 SIRT4, SIR2L4 NAD-dependent deacetylase sirtuin 4, at 1661158 to 1662498 13429 mRNA_5062: 13430 - HMMPfam-Zinc-binding-PF12907,SUPERFAMILY--SSF118359, at 1662567 to 1663555 13430
Group Condition mRNA_5058 mRNA_5059 mRNA_5060 mRNA_5061 mRNA_5062
13426
13427
13428
13429
13430
growth on ricinoleic acid YNB Ricinoleic Acid -2.8 -0.3 0.2 -0.2 0.0
growth on ricinoleic acid YNB Glucose -0.6 -0.5 0.0 -0.6 0.1
growth on ricinoleic acid YNB Methylricinoleic Acid -1.1 -0.3 0.2 -0.5 0.1
facs on lipid accumulation Sorted No BODIPY Gate -0.7 0.3 -0.7 -0.3 -0.1
growth on oleic acid YNB Oleic Acid -1.2 -0.3 -0.0 0.2 -0.2
auxotrophy YNB Glucose -0.9 -0.2 -0.3 0.0 -0.0
auxotrophy YNB Glucose 75mM Arginine -0.9 -0.1 -0.3 0.1 -0.0
facs on lipid accumulation Sorted High BODIPY Gate -0.6 -0.1 -0.3 -0.3 0.1
auxotrophy Dropout Complete -0.5 -0.1 -0.3 -0.1 -0.2
auxotrophy YNB Glucose 75mM Methionine -0.6 -0.1 -0.2 -0.0 -0.1
facs on lipid accumulation Sorted Low BODIPY Gate -0.4 0.3 -0.7 -0.3 0.1
ypd buoyancy 40 hrs Low Buoyancy -0.4 -0.3 -0.3 -0.1 0.4
growth on oleic acid YNB Glucose -0.6 -0.0 0.2 0.0 -0.2
ypd buoyancy 40 hrs High Buoyancy 0.0 -0.2 -0.4 -0.1 0.2
ypd buoyancy 40 hrs Median Buoyancy -0.2 -0.0 -0.3 0.1 0.3
ypd buoyancy 40 hrs No Buoyancy Separation -0.1 0.3 -0.7 0.2 0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.5 -0.0 0.1 0.4 0.4
growth on ypd YPD -0.0 0.3 0.1 0.1 -0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 0.3 -0.4 0.4 0.6
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 -0.0 0.3 -0.0 0.5
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.4 -0.1 0.0 0.3 0.6
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