Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_5055: 13423 - KOG1289 Amino acid transporters, at 1642260 to 1644737 13423 mRNA_5056: 13424 - K02137 ATPeF0O, ATP5O, ATP5 F-type H+-transporting ATPase subunit O, at 1645555 to 1646643 13424 mRNA_5057: 13425 - K03252 EIF3C translation initiation factor 3 subunit C, at 1647426 to 1650006 13425 mRNA_5058: 13426 - K07249 E1.2.1.36 retinal dehydrogenase, at 1650225 to 1652548 13426 mRNA_5059: 13427 - KOG0022 Alcohol dehydrogenase, class III, at 1652748 to 1654435 13427
Group Condition mRNA_5055 mRNA_5056 mRNA_5057 mRNA_5058 mRNA_5059
13423
13424
13425
13426
13427
growth on ricinoleic acid YNB Ricinoleic Acid -0.1     -2.8 -0.3
growth on oleic acid YNB Oleic Acid 0.1     -1.2 -0.3
facs on lipid accumulation Sorted High BODIPY Gate -0.5     -0.6 -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid 0.3     -1.1 -0.3
growth on ricinoleic acid YNB Glucose 0.2     -0.6 -0.5
ypd buoyancy 40 hrs Low Buoyancy 0.0     -0.4 -0.3
facs on lipid accumulation Sorted No BODIPY Gate -0.2     -0.7 0.3
growth on oleic acid YNB Glucose 0.0     -0.6 -0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.2     -0.5 -0.0
auxotrophy YNB Glucose 75mM Arginine 0.7     -0.9 -0.1
ypd buoyancy 40 hrs No Buoyancy Separation -0.5     -0.1 0.3
auxotrophy YNB Glucose 0.8     -0.9 -0.2
auxotrophy YNB Glucose 75mM Methionine 0.6     -0.6 -0.1
auxotrophy Dropout Complete 0.5     -0.5 -0.1
ypd buoyancy 40 hrs Median Buoyancy 0.2     -0.2 -0.0
ypd buoyancy 40 hrs High Buoyancy 0.2     0.0 -0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.0     -0.1 0.3
growth on ypd YPD -0.1     -0.0 0.3
facs on lipid accumulation Sorted Low BODIPY Gate 0.3     -0.4 0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.4     -0.1 -0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.2     0.4 -0.1
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