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Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_5048: 13416 - HMMPfam-Animal haem peroxidase-PF03098,ProSiteProfiles-Animal heme peroxidase superfamily profile.-PS50292,SUPERFAMILY--SSF48113, at 1632775 to 1633418
13416
mRNA_5049: 13417 - HMMPfam-Cytochrome P450-PF00067,SUPERFAMILY--SSF48264, at 1633611 to 1634725
13417
mRNA_5050: 13418 - Hypothetical Protein, at 1634972 to 1635708
13418
mRNA_5051: 13419 - KOG1382 Multiple inositol polyphosphate phosphatase, at 1635968 to 1637866
13419
mRNA_5052: 13420 - Hypothetical Protein, at 1638051 to 1638624
13420
Group
Condition
mRNA_5048
mRNA_5049
mRNA_5050
mRNA_5051
mRNA_5052
13416
13417
13418
13419
13420
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.1
-0.1
-0.4
-1.7
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.5
-0.3
-0.5
-0.5
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.0
-0.1
-0.5
-0.7
facs on lipid accumulation
Sorted Low BODIPY Gate
0.6
-0.2
0.6
-1.9
ypd buoyancy
40 hrs High Buoyancy
-0.7
0.1
0.3
-0.5
facs on lipid accumulation
Sorted High BODIPY Gate
0.2
0.3
0.3
-1.1
growth on oleic acid
YNB Glucose
0.1
-0.2
-0.3
0.3
growth on oleic acid
YNB Oleic Acid
0.0
-0.2
-0.3
0.4
facs on lipid accumulation
Sorted No BODIPY Gate
-0.4
0.1
0.1
0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.3
0.2
-0.2
-0.3
auxotrophy
Dropout Complete
-0.3
-0.2
0.1
0.4
auxotrophy
YNB Glucose 75mM Methionine
0.3
0.0
0.0
-0.1
auxotrophy
YNB Glucose 75mM Arginine
0.1
-0.1
0.3
0.2
auxotrophy
YNB Glucose
-0.1
0.1
0.3
0.2
ypd buoyancy
40 hrs Low Buoyancy
0.3
-0.1
0.1
0.2
ypd buoyancy
40 hrs No Buoyancy Separation
0.6
-0.4
-0.1
0.5
growth on ypd
YPD
0.9
-0.0
0.1
0.0
growth on ricinoleic acid
YNB Ricinoleic Acid
1.2
-0.1
-0.3
0.3
growth on ricinoleic acid
YNB Glucose
1.2
-0.1
-0.4
0.5
ypd buoyancy
40 hrs Median Buoyancy
0.6
0.1
0.0
0.6
growth on ricinoleic acid
YNB Methylricinoleic Acid
1.5
-0.2
-0.2
0.4
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