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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_5041: 13409 - K01077 E3.1.3.1, phoA, phoB alkaline phosphatase, at 1617376 to 1619999
13409
mRNA_5042: 13410 - K11987 PTGS2, COX2 prostaglandin-endoperoxide synthase 2, at 1620186 to 1624463
13410
mRNA_5043: 13411 - PIRSF--PIRSF022976, at 1624798 to 1625839
13411
mRNA_5044: 13412 - K04717 SGPP2 sphingosine-1-phosphate phosphotase 2, at 1626185 to 1628118
13412
mRNA_5045: 13413 - K01111 E3.1.3.68 2-deoxyglucose-6-phosphatase, at 1628554 to 1629804
13413
Group
Condition
mRNA_5041
mRNA_5042
mRNA_5043
mRNA_5044
mRNA_5045
13409
13410
13411
13412
13413
facs on lipid accumulation
Sorted Low BODIPY Gate
0.4
-0.4
0.2
-0.8
0.1
growth on oleic acid
YNB Glucose
-0.1
-0.1
-0.3
0.2
-0.2
ypd buoyancy
40 hrs No Buoyancy Separation
-0.1
-0.6
0.3
-0.3
0.1
ypd buoyancy
40 hrs Median Buoyancy
0.1
-0.2
0.1
-0.0
-0.4
growth on oleic acid
YNB Oleic Acid
0.1
-0.1
-0.1
0.2
-0.5
ypd buoyancy
40 hrs Low Buoyancy
0.1
-0.1
-0.0
0.1
-0.2
ypd buoyancy
40 hrs High Buoyancy
-0.0
-0.1
0.1
-0.0
-0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.0
0.1
-0.5
0.0
0.3
facs on lipid accumulation
Sorted High BODIPY Gate
0.3
-0.4
0.2
-0.0
-0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
0.1
0.1
-0.6
-0.2
0.7
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.2
-0.2
-0.3
0.1
0.3
facs on lipid accumulation
Sorted No BODIPY Gate
0.2
-0.2
-0.0
-0.2
0.4
growth on ricinoleic acid
YNB Glucose
-0.1
-0.0
-0.4
-0.1
0.9
growth on ricinoleic acid
YNB Methylricinoleic Acid
0.1
0.1
-0.7
0.3
0.6
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.2
0.1
-0.1
0.0
0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.1
-0.2
0.1
0.1
0.2
auxotrophy
Dropout Complete
0.1
0.2
-0.1
0.2
0.6
auxotrophy
YNB Glucose 75mM Methionine
0.2
0.5
0.1
-0.1
0.5
auxotrophy
YNB Glucose 75mM Arginine
0.1
0.4
0.1
0.0
0.6
auxotrophy
YNB Glucose
0.3
0.3
0.0
-0.1
0.7
growth on ypd
YPD
0.3
-0.0
0.4
-0.1
0.7
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