Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_5040: 13408 - K11987 PTGS2, COX2 prostaglandin-endoperoxide synthase 2, at 1615086 to 1617129 13408 mRNA_5041: 13409 - K01077 E3.1.3.1, phoA, phoB alkaline phosphatase, at 1617376 to 1619999 13409 mRNA_5042: 13410 - K11987 PTGS2, COX2 prostaglandin-endoperoxide synthase 2, at 1620186 to 1624463 13410 mRNA_5043: 13411 - PIRSF--PIRSF022976, at 1624798 to 1625839 13411 mRNA_5044: 13412 - K04717 SGPP2 sphingosine-1-phosphate phosphotase 2, at 1626185 to 1628118 13412
Group Condition mRNA_5040 mRNA_5041 mRNA_5042 mRNA_5043 mRNA_5044
13408
13409
13410
13411
13412
growth on ricinoleic acid YNB Glucose -0.2 -0.1 -0.0 -0.4 -0.1
growth on ricinoleic acid YNB Ricinoleic Acid 0.2 0.1 0.1 -0.6 -0.2
ypd buoyancy 40 hrs No Buoyancy Separation 0.4 -0.1 -0.6 0.3 -0.3
growth on oleic acid YNB Glucose 0.2 -0.1 -0.1 -0.3 0.2
ypd buoyancy 40 hrs Median Buoyancy -0.1 0.1 -0.2 0.1 -0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.3 0.0 0.1 -0.5 0.0
growth on ricinoleic acid YNB Methylricinoleic Acid 0.1 0.1 0.1 -0.7 0.3
ypd buoyancy 40 hrs Low Buoyancy -0.1 0.1 -0.1 -0.0 0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.3 0.2 -0.2 -0.3 0.1
facs on lipid accumulation Sorted Low BODIPY Gate 0.7 0.4 -0.4 0.2 -0.8
ypd buoyancy 40 hrs High Buoyancy 0.2 -0.0 -0.1 0.1 -0.0
growth on oleic acid YNB Oleic Acid -0.0 0.1 -0.1 -0.1 0.2
facs on lipid accumulation Sorted No BODIPY Gate 0.7 0.2 -0.2 -0.0 -0.2
auxotrophy Dropout Complete 0.1 0.1 0.2 -0.1 0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.2 0.2 0.1 -0.1 0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.4 0.1 -0.2 0.1 0.1
auxotrophy YNB Glucose 75mM Methionine -0.0 0.2 0.5 0.1 -0.1
auxotrophy YNB Glucose 75mM Arginine 0.1 0.1 0.4 0.1 0.0
auxotrophy YNB Glucose 0.2 0.3 0.3 0.0 -0.1
facs on lipid accumulation Sorted High BODIPY Gate 0.9 0.3 -0.4 0.2 -0.0
growth on ypd YPD 0.4 0.3 -0.0 0.4 -0.1
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