Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_5037: 13405 - HMMPfam-Phosphotransferase enzyme family-PF01636,SUPERFAMILY--SSF56112, at 1610939 to 1612058 13405 mRNA_5038: 13406 - Hypothetical Protein, at 1613042 to 1613500 13406 mRNA_5039: 13407 - Hypothetical Protein, at 1614263 to 1614994 13407 mRNA_5040: 13408 - K11987 PTGS2, COX2 prostaglandin-endoperoxide synthase 2, at 1615086 to 1617129 13408 mRNA_5041: 13409 - K01077 E3.1.3.1, phoA, phoB alkaline phosphatase, at 1617376 to 1619999 13409
Group Condition mRNA_5037 mRNA_5038 mRNA_5039 mRNA_5040 mRNA_5041
13405
13406
13407
13408
13409
growth on ricinoleic acid YNB Methylricinoleic Acid 0.2 -2.3 -0.1 0.1 0.1
ypd buoyancy 40 hrs No Buoyancy Separation 0.0 -1.0 -1.0 0.4 -0.1
growth on ricinoleic acid YNB Glucose -0.4 -0.7 -0.3 -0.2 -0.1
auxotrophy YNB Glucose 75mM Arginine -0.1 -1.2 -0.3 0.1 0.1
ypd buoyancy 40 hrs High Buoyancy 0.2 -1.5 -0.3 0.2 -0.0
auxotrophy YNB Glucose 75mM Methionine -0.1 -1.0 -0.4 -0.0 0.2
auxotrophy Dropout Complete -0.3 -0.7 -0.2 0.1 0.1
growth on ricinoleic acid YNB Ricinoleic Acid 0.2 -1.0 -0.1 0.2 0.1
growth on oleic acid YNB Glucose 0.2 -0.7 -0.3 0.2 -0.1
auxotrophy YNB Glucose -0.5 -0.1 -0.5 0.2 0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.1 -1.0 0.4 0.3 0.2
ypd buoyancy 40 hrs Median Buoyancy 0.3 -0.0 0.0 -0.1 0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.0 -0.5 0.4 0.3 0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.0 -0.7 0.5 0.2 0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.2 -0.7 0.7 0.4 0.1
growth on oleic acid YNB Oleic Acid 0.3 0.4 -0.3 -0.0 0.1
ypd buoyancy 40 hrs Low Buoyancy 0.2 0.2 0.2 -0.1 0.1
growth on ypd YPD 0.1 -0.1 0.2 0.4 0.3
facs on lipid accumulation Sorted High BODIPY Gate 0.3 0.0 0.3 0.9 0.3
facs on lipid accumulation Sorted No BODIPY Gate 0.6 0.2 0.1 0.7 0.2
facs on lipid accumulation Sorted Low BODIPY Gate 0.3 0.6 0.6 0.7 0.4
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