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Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_5035: 13403 - K11304 TIP60, KAT5, ESA1 histone acetyltransferase HTATIP, at 1607963 to 1609879
13403
mRNA_5036: 13404 - Hypothetical Protein, at 1610086 to 1610551
13404
mRNA_5037: 13405 - HMMPfam-Phosphotransferase enzyme family-PF01636,SUPERFAMILY--SSF56112, at 1610939 to 1612058
13405
mRNA_5038: 13406 - Hypothetical Protein, at 1613042 to 1613500
13406
mRNA_5039: 13407 - Hypothetical Protein, at 1614263 to 1614994
13407
Group
Condition
mRNA_5035
mRNA_5036
mRNA_5037
mRNA_5038
mRNA_5039
13403
13404
13405
13406
13407
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.2
0.2
-2.3
-0.1
ypd buoyancy
40 hrs No Buoyancy Separation
-0.4
0.0
-1.0
-1.0
auxotrophy
YNB Glucose 75mM Methionine
-0.1
-0.1
-1.0
-0.4
ypd buoyancy
40 hrs High Buoyancy
-0.1
0.2
-1.5
-0.3
auxotrophy
YNB Glucose 75mM Arginine
0.1
-0.1
-1.2
-0.3
growth on ricinoleic acid
YNB Glucose
-0.1
-0.4
-0.7
-0.3
auxotrophy
Dropout Complete
0.1
-0.3
-0.7
-0.2
auxotrophy
YNB Glucose
-0.1
-0.5
-0.1
-0.5
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.1
0.2
-1.0
-0.1
growth on oleic acid
YNB Glucose
-0.2
0.2
-0.7
-0.3
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.1
0.1
-1.0
0.4
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.1
0.0
-0.7
0.5
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.1
-0.0
-0.5
0.4
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.0
-0.2
-0.7
0.7
growth on oleic acid
YNB Oleic Acid
-0.4
0.3
0.4
-0.3
ypd buoyancy
40 hrs Median Buoyancy
-0.2
0.3
-0.0
0.0
growth on ypd
YPD
0.2
0.1
-0.1
0.2
facs on lipid accumulation
Sorted High BODIPY Gate
-0.1
0.3
0.0
0.3
ypd buoyancy
40 hrs Low Buoyancy
-0.0
0.2
0.2
0.2
facs on lipid accumulation
Sorted No BODIPY Gate
-0.2
0.6
0.2
0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
0.1
0.3
0.6
0.6
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