Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_5031: 13399 - HMMPfam-PAS fold-PF00989,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,ProSiteProfiles-PAS repeat profile.-PS50112,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF55785, at 1595047 to 1597304 13399 mRNA_5032: 13400 - Hypothetical Protein, at 1597807 to 1600574 13400 mRNA_5033: 13401 - KOG4436 Predicted GTPase activator NB4S/EVI5 (contains TBC domain)/Calmodulin-binding protein Pollux (contains PTB and TBC domains), at 1601468 to 1605781 13401 mRNA_5034: 13402 - KOG4589 Cell division protein FtsJ, at 1606739 to 1607440 13402 mRNA_5035: 13403 - K11304 TIP60, KAT5, ESA1 histone acetyltransferase HTATIP, at 1607963 to 1609879 13403
Group Condition mRNA_5031 mRNA_5032 mRNA_5033 mRNA_5034 mRNA_5035
13399
13400
13401
13402
13403
growth on ricinoleic acid YNB Ricinoleic Acid -2.6 -0.3 -0.1 0.6  
growth on ricinoleic acid YNB Methylricinoleic Acid -2.2 0.2 -0.5 0.4  
ypd buoyancy 40 hrs No Buoyancy Separation -0.4 -1.7 0.4 -0.3  
growth on oleic acid YNB Oleic Acid -0.7 -0.1 -0.1 0.2  
growth on ricinoleic acid YNB Glucose -0.3 -0.0 -0.5 0.5  
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.1 0.2 -0.0 -0.7  
auxotrophy YNB Glucose 75mM Methionine -0.2 0.2 -0.0 -0.2  
auxotrophy YNB Glucose 75mM Arginine -0.3 0.3 -0.2 0.1  
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.4 0.0 -0.2 -0.3  
facs on lipid accumulation Sorted Low BODIPY Gate 0.0 0.3 -0.1 -0.1  
auxotrophy YNB Glucose -0.4 0.0 -0.0 0.5  
ypd buoyancy 40 hrs Median Buoyancy -0.0 0.2 0.1 -0.1  
ypd buoyancy 40 hrs Low Buoyancy 0.3 -0.1 0.1 -0.0  
auxotrophy Dropout Complete 0.0 0.1 -0.0 0.2  
facs on lipid accumulation Sorted No BODIPY Gate 0.2 0.1 0.2 -0.2  
growth on ypd YPD -0.0 -0.2 0.1 0.6  
ypd buoyancy 40 hrs High Buoyancy 0.1 -0.1 0.4 0.1  
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.0 0.7 0.2 -0.2  
facs on lipid accumulation Sorted High BODIPY Gate 0.3 0.4 0.2 -0.1  
growth on oleic acid YNB Glucose -0.2 0.8 -0.3 0.6  
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.6 0.3 0.0 0.1  
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