Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_5030: 13398 - K01889 FARSA, pheS phenylalanyl-tRNA synthetase alpha chain, at 1592734 to 1594516 13398 mRNA_5031: 13399 - HMMPfam-PAS fold-PF00989,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,ProSiteProfiles-PAS repeat profile.-PS50112,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF55785, at 1595047 to 1597304 13399 mRNA_5032: 13400 - Hypothetical Protein, at 1597807 to 1600574 13400 mRNA_5033: 13401 - KOG4436 Predicted GTPase activator NB4S/EVI5 (contains TBC domain)/Calmodulin-binding protein Pollux (contains PTB and TBC domains), at 1601468 to 1605781 13401 mRNA_5034: 13402 - KOG4589 Cell division protein FtsJ, at 1606739 to 1607440 13402
Group Condition mRNA_5030 mRNA_5031 mRNA_5032 mRNA_5033 mRNA_5034
13398
13399
13400
13401
13402
growth on ricinoleic acid YNB Ricinoleic Acid   -2.6 -0.3 -0.1 0.6
growth on ricinoleic acid YNB Methylricinoleic Acid   -2.2 0.2 -0.5 0.4
ypd buoyancy 40 hrs No Buoyancy Separation   -0.4 -1.7 0.4 -0.3
growth on oleic acid YNB Oleic Acid   -0.7 -0.1 -0.1 0.2
growth on ricinoleic acid YNB Glucose   -0.3 -0.0 -0.5 0.5
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation   0.1 0.2 -0.0 -0.7
auxotrophy YNB Glucose 75mM Methionine   -0.2 0.2 -0.0 -0.2
auxotrophy YNB Glucose 75mM Arginine   -0.3 0.3 -0.2 0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy   0.4 0.0 -0.2 -0.3
facs on lipid accumulation Sorted Low BODIPY Gate   0.0 0.3 -0.1 -0.1
auxotrophy YNB Glucose   -0.4 0.0 -0.0 0.5
ypd buoyancy 40 hrs Median Buoyancy   -0.0 0.2 0.1 -0.1
ypd buoyancy 40 hrs Low Buoyancy   0.3 -0.1 0.1 -0.0
auxotrophy Dropout Complete   0.0 0.1 -0.0 0.2
facs on lipid accumulation Sorted No BODIPY Gate   0.2 0.1 0.2 -0.2
growth on ypd YPD   -0.0 -0.2 0.1 0.6
ypd buoyancy 40 hrs High Buoyancy   0.1 -0.1 0.4 0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy   -0.0 0.7 0.2 -0.2
facs on lipid accumulation Sorted High BODIPY Gate   0.3 0.4 0.2 -0.1
growth on oleic acid YNB Glucose   -0.2 0.8 -0.3 0.6
buoyancy on lipid accumulation 40 hrs High Buoyancy   0.6 0.3 0.0 0.1
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