Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_5027: 13395 - HMMPfam-Cryptococcal mannosyltransferase 1-PF11735, at 1585224 to 1587309 13395 mRNA_5028: 13396 - HMMPfam-Cryptococcal mannosyltransferase 1-PF11735, at 1588413 to 1590373 13396 mRNA_5029: 13397 - HMMPfam-Ornithine decarboxylase antizyme-PF02100,SUPERFAMILY--SSF55729, at 1591057 to 1592630 13397 mRNA_5030: 13398 - K01889 FARSA, pheS phenylalanyl-tRNA synthetase alpha chain, at 1592734 to 1594516 13398 mRNA_5031: 13399 - HMMPfam-PAS fold-PF00989,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,ProSiteProfiles-PAS repeat profile.-PS50112,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF55785, at 1595047 to 1597304 13399
Group Condition mRNA_5027 mRNA_5028 mRNA_5029 mRNA_5030 mRNA_5031
13395
13396
13397
13398
13399
ypd buoyancy 40 hrs No Buoyancy Separation -0.8 -0.1 -0.5   -0.4
growth on ricinoleic acid YNB Ricinoleic Acid 0.1 0.5 0.3   -2.6
growth on ricinoleic acid YNB Methylricinoleic Acid 0.2 0.3 0.2   -2.2
growth on oleic acid YNB Oleic Acid -0.5 0.1 -0.1   -0.7
facs on lipid accumulation Sorted No BODIPY Gate -1.0 -0.1 0.1   0.2
growth on ricinoleic acid YNB Glucose -0.2 0.0 -0.1   -0.3
auxotrophy Dropout Complete -0.8 0.1 0.2   0.0
facs on lipid accumulation Sorted Low BODIPY Gate -0.3 -0.3 0.1   0.0
auxotrophy YNB Glucose 75mM Arginine -0.6 0.4 0.1   -0.3
auxotrophy YNB Glucose -0.5 0.3 0.1   -0.4
growth on oleic acid YNB Glucose 0.2 -0.4 0.0   -0.2
facs on lipid accumulation Sorted High BODIPY Gate -0.8 0.1 0.1   0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.0 -0.4 0.1   0.1
auxotrophy YNB Glucose 75mM Methionine -0.5 0.4 0.1   -0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 -0.0 0.1   -0.0
ypd buoyancy 40 hrs High Buoyancy -0.3 0.4 -0.1   0.1
growth on ypd YPD 0.7 -0.3 -0.1   -0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.4 -0.2 -0.2   0.4
ypd buoyancy 40 hrs Median Buoyancy 0.3 0.2 -0.0   -0.0
ypd buoyancy 40 hrs Low Buoyancy 0.3 0.1 0.1   0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 0.1 0.1   0.6
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