Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_5024: 13392 - K11124 SMG6, EST1A protein SMG6, at 1575656 to 1580280 13392 mRNA_5025: 13393 - BLAST HECT-type ubiquitin ligase-interacting protein creD [..., at 1580714 to 1583108 13393 mRNA_5026: 13394 - K01698 hemB, ALAD porphobilinogen synthase, at 1583295 to 1584679 13394 mRNA_5027: 13395 - HMMPfam-Cryptococcal mannosyltransferase 1-PF11735, at 1585224 to 1587309 13395 mRNA_5028: 13396 - HMMPfam-Cryptococcal mannosyltransferase 1-PF11735, at 1588413 to 1590373 13396
Group Condition mRNA_5024 mRNA_5025 mRNA_5026 mRNA_5027 mRNA_5028
13392
13393
13394
13395
13396
ypd buoyancy 40 hrs No Buoyancy Separation -2.3 -0.3   -0.8 -0.1
facs on lipid accumulation Sorted High BODIPY Gate -1.1 0.3   -0.8 0.1
facs on lipid accumulation Sorted No BODIPY Gate -0.2 0.1   -1.0 -0.1
auxotrophy Dropout Complete 0.4 -0.3   -0.8 0.1
ypd buoyancy 40 hrs High Buoyancy -0.3 -0.3   -0.3 0.4
facs on lipid accumulation Sorted Low BODIPY Gate 0.2 -0.1   -0.3 -0.3
auxotrophy YNB Glucose 75mM Arginine 0.4 -0.4   -0.6 0.4
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.3 -0.2   -0.0 -0.4
ypd buoyancy 40 hrs Median Buoyancy -0.6 -0.1   0.3 0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.3 -0.2   -0.1 -0.0
growth on ypd YPD -0.7 0.2   0.7 -0.3
auxotrophy YNB Glucose 0.3 -0.2   -0.5 0.3
ypd buoyancy 40 hrs Low Buoyancy 0.1 -0.4   0.3 0.1
growth on oleic acid YNB Oleic Acid 0.6 -0.2   -0.5 0.1
growth on oleic acid YNB Glucose 0.3 0.0   0.2 -0.4
growth on ricinoleic acid YNB Glucose 0.7 -0.5   -0.2 0.0
auxotrophy YNB Glucose 75mM Methionine 0.5 -0.2   -0.5 0.4
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.9 -0.5   -0.1 0.1
growth on ricinoleic acid YNB Methylricinoleic Acid 0.1 -0.2   0.2 0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.4 -0.1   0.4 -0.2
growth on ricinoleic acid YNB Ricinoleic Acid 0.5 -0.6   0.1 0.5
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