Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_5021: 13389 - K14347 SLC10A7, P7 solute carrier family 10 (sodium/bile acid cotransporter), member 7, at 1569492 to 1571260 13389 mRNA_5022: 13390 - Hypothetical Protein, at 1571502 to 1572574 13390 mRNA_5023: 13391 - K17866 DPH2 diphthamide biosynthesis protein 2, at 1572815 to 1575164 13391 mRNA_5024: 13392 - K11124 SMG6, EST1A protein SMG6, at 1575656 to 1580280 13392 mRNA_5025: 13393 - BLAST HECT-type ubiquitin ligase-interacting protein creD [..., at 1580714 to 1583108 13393
Group Condition mRNA_5021 mRNA_5022 mRNA_5023 mRNA_5024 mRNA_5025
13389
13390
13391
13392
13393
ypd buoyancy 40 hrs No Buoyancy Separation -0.5 -0.1 0.3 -2.3 -0.3
ypd buoyancy 40 hrs High Buoyancy -0.0 -0.4 -0.3 -0.3 -0.3
growth on ypd YPD 0.0 -0.5 -0.1 -0.7 0.2
growth on ricinoleic acid YNB Ricinoleic Acid 0.5 0.0 -1.4 0.5 -0.6
auxotrophy YNB Glucose 0.2 -0.4 -0.8 0.3 -0.2
ypd buoyancy 40 hrs Low Buoyancy -0.1 -0.2 -0.4 0.1 -0.4
facs on lipid accumulation Sorted High BODIPY Gate 0.5 -0.2 -0.3 -1.1 0.3
ypd buoyancy 40 hrs Median Buoyancy -0.1 -0.0 0.0 -0.6 -0.1
growth on oleic acid YNB Glucose -0.0 -0.6 -0.3 0.3 0.0
auxotrophy Dropout Complete 0.0 -0.5 -0.0 0.4 -0.3
auxotrophy YNB Glucose 75mM Arginine 0.4 -0.3 -0.4 0.4 -0.4
growth on ricinoleic acid YNB Methylricinoleic Acid 0.5 -0.1 -0.5 0.1 -0.2
growth on ricinoleic acid YNB Glucose 0.4 -0.3 -0.5 0.7 -0.5
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.0 -0.1 -0.3 0.4 -0.1
growth on oleic acid YNB Oleic Acid 0.1 -0.2 -0.4 0.6 -0.2
auxotrophy YNB Glucose 75mM Methionine 0.2 -0.4 0.1 0.5 -0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.3 0.2 0.1 0.3 -0.2
facs on lipid accumulation Sorted Low BODIPY Gate 0.3 0.6 -0.7 0.2 -0.1
facs on lipid accumulation Sorted No BODIPY Gate 0.8 0.3 -0.2 -0.2 0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 0.1 0.5 0.9 -0.5
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.1 0.9 0.1 0.3 -0.2
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